Non-Coding RNA Search

rlnt32c_j5.y1

Sequence:


               
               CTACTGGGGCCTCATTAGAATATACTGTGGACCATTCTGCAACCCATGTCAAATGGCACG
TGACCTCTCTTTCTCCCGTGGGACCTGTTATTCAAAGCGAAGAAACGGTATTCCACCATG
GGGCCGTGATTCTGTACAAGGCCATCGACCGTAACCCGTCCTTGTCTTTTCGAGTGTACA
TAGCAACCAATAATGAGTCCTTCATCAAGGACATTTCCAAGTCTGTAAAGCACTCCTCTA
AGAAATTCATGAAAATCGACAAGCCTCCTGTTTGCCAGAAGTTATTGCAGAATGGGAAGA
AGTACAGACTGATCAGTAAGCCGGAAGTTGAAATCACCCCGGAGGAAGTTGAATTTGTCG
ATGGATCACTTTTAAAATTGAAAAGTTATATTGAAGTGTATTTGGAGCAACCCATGGAAT
TTAAATTACTTTTGGTTGAAAAGGATTCTGAGGAGATTGTATGGAAAGCAAAGCTGAGAG
AGTGTGACTGGGTTCAGCATGATCAGAATCAAAACGTTTCAAAAAGCAACACAAGTGGTA
ACAGGCGACGAAAAATGAGTAGCAGCTTACCTGATGAAGTGGTCTATGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACTGGGGCCTCATTAGAATATACTGTGGACCATTCTGCAACCCATGTCAAATGGCACG
TGACCTCTCTTTCTCCCGTGGGACCTGTTATTCAAAGCGAAGAAACGGTATTCCACCATG
GGGCCGTGATTCTGTACAAGGCCATCGACCGTAACCCGTCCTTGTCTTTTCGAGTGTACA
TAGCAACCAATAATGAGTCCTTCATCAAGGACATTTCCAAGTCTGTAAAGCACTCCTCTA
AGAAATTCATGAAAATCGACAAGCCTCCTGTTTGCCAGAAGTTATTGCAGAATGGGAAGA
AGTACAGACTGATCAGTAAGCCGGAAGTTGAAATCACCCCGGAGGAAGTTGAATTTGTCG
ATGGATCACTTTTAAAATTGAAAAGTTATATTGAAGTGTATTTGGAGCAACCCATGGAAT
TTAAATTACTTTTGGTTGAAAAGGATTCTGAGGAGATTGTATGGAAAGCAAAGCTGAGAG
AGTGTGACTGGGTTCAGCATGATCAGAATCAAAACGTTTCAAAAAGCAACACAAGTGGTA
ACAGGCGACGAAAAATGAGTAGCAGCTTACCTGATGAAGTGGTCTATGATA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               2-210, gnl|bosTau2|chr1 (67491189-67490981)
               

               
               2-210, gnl|canFam2|chr34 (29163963-29163759)
               

               
               2-210, gnl|dasNov1|scaffold_21288 (36628-36821)
               

               
               2-210, gnl|hg17|chr1 (227755847-227756043)
               

               
               2-210, gnl|Hg17|chr3 (161217410-161216900)
               

               
               2-210, gnl|oryCun1|scaffold_207541 (15525-15734)
               

               
               2-210, gnl|panTro1|chr1 (211612782-211612978)
               

               
               2-210, gnl|rheMac2|chr1 (225642263-225642068)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-210, gnl|bosTau2|chr1 (67491189-67490981)
               

               
               2-210, gnl|canFam2|chr34 (29163963-29163759)
               

               
               2-210, gnl|dasNov1|scaffold_21288 (36628-36821)
               

               
               2-210, gnl|hg17|chr1 (227755847-227756043)
               

               
               2-210, gnl|Hg17|chr3 (161217410-161216900)
               

               
               2-210, gnl|oryCun1|scaffold_207541 (15525-15734)
               

               
               2-210, gnl|panTro1|chr1 (211612782-211612978)
               

               
               2-210, gnl|rheMac2|chr1 (225642263-225642068)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	2-210, gnl\|bosTau2\|chr1 (67491189-67490981)
	2-210, gnl\|canFam2\|chr34 (29163963-29163759)
	2-210, gnl\|dasNov1\|scaffold_21288 (36628-36821)
	2-210, gnl\|hg17\|chr1 (227755847-227756043)
	2-210, gnl\|Hg17\|chr3 (161217410-161216900)
	2-210, gnl\|oryCun1\|scaffold_207541 (15525-15734)
	2-210, gnl\|panTro1\|chr1 (211612782-211612978)
	2-210, gnl\|rheMac2\|chr1 (225642263-225642068)