Non-Coding RNA Search

rlyg31_n5.y1

Sequence:


               
               TCGGACCTCGGAGCGCACACAGCGGTGCAAGTGGGTGCCACTCCGAATCCCCACGCTCAT
TATTTCTCCCCGGCGGTGACAGCGCTTCTGGAAAGACAGCGCGATGAACCGAAGGACTGC
CTGGGGCATGGGCGCGCGGTCCTAAGACACTCGCTTCCTGAACACCAGGCGGGAGGCGAC
CAGCGAAAGGTGGACTGGGAGACCACCGTGCACCTGGGAGGCGCGGACCACCGGCGTGAG
ACAGCACCTGGGGCGCAGCGGCCAGATCTGCACAGTGATGGCACTTACTTCAGTTACGAG
TTGCTCAGCGGACTGTGGAGTGACTGAACTATACCCATTCCCGTCATGATGCACACCCCT
GAGGTTCCTCACCAGTAGGTATTGTCTATTCAGTATCATTTATATGGTTCTATATTGAGA
CTTTTCAACAGAATCTACATTTACGTTGCAAAAATATGCAAAATGCATGCATTTGTATTG
CTGTTAGGAAATATGGCTAGACTTAGTCTGTGTACAACCACTTGGAAAATGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGGACCTCGGAGCGCACACAGCGGTGCAAGTGGGTGCCACTCCGAATCCCCACGCTCAT
TATTTCTCCCCGGCGGTGACAGCGCTTCTGGAAAGACAGCGCGATGAACCGAAGGACTGC
CTGGGGCATGGGCGCGCGGTCCTAAGACACTCGCTTCCTGAACACCAGGCGGGAGGCGAC
CAGCGAAAGGTGGACTGGGAGACCACCGTGCACCTGGGAGGCGCGGACCACCGGCGTGAG
ACAGCACCTGGGGCGCAGCGGCCAGATCTGCACAGTGATGGCACTTACTTCAGTTACGAG
TTGCTCAGCGGACTGTGGAGTGACTGAACTATACCCATTCCCGTCATGATGCACACCCCT
GAGGTTCCTCACCAGTAGGTATTGTCTATTCAGTATCATTTATATGGTTCTATATTGAGA
CTTTTCAACAGAATCTACATTTACGTTGCAAAAATATGCAAAATGCATGCATTTGTATTG
CTGTTAGGAAATATGGCTAGACTTAGTCTGTGTACAACCACTTGGAAAATGAAAAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-265, gnl|bosTau2|chr28 (7089346-7089613)
               

               
               1-265, gnl|canFam2|chr4 (3998862-3998384)
               

               
               1-265, gnl|echTel1|scaffold_285913 (66411-66034)
               

               
               1-265, gnl|hg17|chr1 (235876103-235876517)
               

               
               1-265, gnl|Hg17|chr1 (235876302-235876568)
               

               
               1-265, gnl|mm7|chr13 (10274200-10273766)
               

               
               1-265, gnl|Mm7|chr13 (10273987-10273712)
               

               
               1-265, gnl|monDom2|scaffold_13 (45027954-45027511)
               

               
               1-265, gnl|panTro1|chr1 (219848693-219849107)
               

               
               1-265, gnl|rheMac2|chr1 (217657583-217657169)
               

               
               1-265, gnl|rn3|chr17 (70759478-70759920)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-265, gnl|bosTau2|chr28 (7089346-7089613)
               

               
               1-265, gnl|canFam2|chr4 (3998862-3998384)
               

               
               1-265, gnl|echTel1|scaffold_285913 (66411-66034)
               

               
               1-265, gnl|hg17|chr1 (235876103-235876517)
               

               
               1-265, gnl|Hg17|chr1 (235876302-235876568)
               

               
               1-265, gnl|mm7|chr13 (10274200-10273766)
               

               
               1-265, gnl|Mm7|chr13 (10273987-10273712)
               

               
               1-265, gnl|monDom2|scaffold_13 (45027954-45027511)
               

               
               1-265, gnl|panTro1|chr1 (219848693-219849107)
               

               
               1-265, gnl|rheMac2|chr1 (217657583-217657169)
               

               
               1-265, gnl|rn3|chr17 (70759478-70759920)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lyg (0.133103)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)

	1-265, gnl\|bosTau2\|chr28 (7089346-7089613)
	1-265, gnl\|canFam2\|chr4 (3998862-3998384)
	1-265, gnl\|echTel1\|scaffold_285913 (66411-66034)
	1-265, gnl\|hg17\|chr1 (235876103-235876517)
	1-265, gnl\|Hg17\|chr1 (235876302-235876568)
	1-265, gnl\|mm7\|chr13 (10274200-10273766)
	1-265, gnl\|Mm7\|chr13 (10273987-10273712)
	1-265, gnl\|monDom2\|scaffold_13 (45027954-45027511)
	1-265, gnl\|panTro1\|chr1 (219848693-219849107)
	1-265, gnl\|rheMac2\|chr1 (217657583-217657169)
	1-265, gnl\|rn3\|chr17 (70759478-70759920)