Non-Coding RNA Search

rmas905b_n7.y1

Sequence:


               
               GTGATTTTGAGGATGATTGGGAAAACTTACTAAGTCATGAGCCTTTTATGCAGAATGTTG
AAATGTCTGAACCTTTCCCCGCTCCTAAAATAGCCCAGATTGCTGATCAAAAGGAATTGT
GTACCTTTAACAGTATAAATGATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGATTTTGAGGATGATTGGGAAAACTTACTAAGTCATGAGCCTTTTATGCAGAATGTTG
AAATGTCTGAACCTTTCCCCGCTCCTAAAATAGCCCAGATTGCTGATCAAAAGGAATTGT
GTACCTTTAACAGTATAAATGATAAA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-146, gnl|bosTau2|chr11 (41712191-41712339)
               

               
               1-146, gnl|canFam2|chr10 (69788099-69788349)
               

               
               1-146, gnl|dasNov1|scaffold_12067 (37349-37584)
               

               
               1-146, gnl|echTel1|scaffold_294066 (19635-19385)
               

               
               1-146, gnl|galGal2|chr3 (6267433-6267193)
               

               
               1-146, gnl|hg17|chr2 (67542531-67542778)
               

               
               1-146, gnl|Hg17|chr2 (67542595-67542740)
               

               
               1-146, gnl|mm7|chr11 (17899055-17898808)
               

               
               1-146, gnl|Mm7|chr11 (17898989-17898844)
               

               
               1-146, gnl|monDom2|scaffold_1 (33832248-33832507)
               

               
               1-146, gnl|oryCun1|scaffold_214655 (38244-38491)
               

               
               1-146, gnl|panTro1|chr12 (69792113-69792360)
               

               
               1-146, gnl|rheMac2|chr13 (67676620-67676867)
               

               
               1-146, gnl|rn3|chr14 (98835329-98835082)
               

               
               1-146, gnl|xenTro1|scaffold_112 (805786-806076)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr11 (41712191-41712339)
               

               
               1-146, gnl|canFam2|chr10 (69788099-69788349)
               

               
               1-146, gnl|dasNov1|scaffold_12067 (37349-37584)
               

               
               1-146, gnl|echTel1|scaffold_294066 (19635-19385)
               

               
               1-146, gnl|galGal2|chr3 (6267433-6267193)
               

               
               1-146, gnl|hg17|chr2 (67542531-67542778)
               

               
               1-146, gnl|Hg17|chr2 (67542595-67542740)
               

               
               1-146, gnl|mm7|chr11 (17899055-17898808)
               

               
               1-146, gnl|Mm7|chr11 (17898989-17898844)
               

               
               1-146, gnl|monDom2|scaffold_1 (33832248-33832507)
               

               
               1-146, gnl|oryCun1|scaffold_214655 (38244-38491)
               

               
               1-146, gnl|panTro1|chr12 (69792113-69792360)
               

               
               1-146, gnl|rheMac2|chr13 (67676620-67676867)
               

               
               1-146, gnl|rn3|chr14 (98835329-98835082)
               

               
               1-146, gnl|xenTro1|scaffold_112 (805786-806076)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	1-146, gnl\|bosTau2\|chr11 (41712191-41712339)
	1-146, gnl\|canFam2\|chr10 (69788099-69788349)
	1-146, gnl\|dasNov1\|scaffold_12067 (37349-37584)
	1-146, gnl\|echTel1\|scaffold_294066 (19635-19385)
	1-146, gnl\|galGal2\|chr3 (6267433-6267193)
	1-146, gnl\|hg17\|chr2 (67542531-67542778)
	1-146, gnl\|Hg17\|chr2 (67542595-67542740)
	1-146, gnl\|mm7\|chr11 (17899055-17898808)
	1-146, gnl\|Mm7\|chr11 (17898989-17898844)
	1-146, gnl\|monDom2\|scaffold_1 (33832248-33832507)
	1-146, gnl\|oryCun1\|scaffold_214655 (38244-38491)
	1-146, gnl\|panTro1\|chr12 (69792113-69792360)
	1-146, gnl\|rheMac2\|chr13 (67676620-67676867)
	1-146, gnl\|rn3\|chr14 (98835329-98835082)
	1-146, gnl\|xenTro1\|scaffold_112 (805786-806076)