Non-Coding RNA Search

rmas907b_o9.y1

Sequence:


               
               GGCCAACTCGCTGCCGAATGGGGACAAGTCCCAGAAGAGACCCGAGAAGCGGCGGCAGTC
CCTCGGGGGCTTCTTCAAGGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAAC
TGACCCCGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCACCGTGGTTCCCA
AGTTCTGCCACCAAGATGTCTTCTTCCTACTCCCCAAATCCACTCCGTGTACATATCTTT
TCTTCTGATGGCCATCATATGAAATTCTGCCTACACATTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAACTCGCTGCCGAATGGGGACAAGTCCCAGAAGAGACCCGAGAAGCGGCGGCAGTC
CCTCGGGGGCTTCTTCAAGGGCCTGGGACCAAAGCGGATGTTGGATGCTCAAGTGCAAAC
TGACCCCGTATCCATCGGACCAGTTGGCAAATCCAAGTAAACAAATCACCGTGGTTCCCA
AGTTCTGCCACCAAGATGTCTTCTTCCTACTCCCCAAATCCACTCCGTGTACATATCTTT
TCTTCTGATGGCCATCATATGAAATTCTGCCTACACATTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28913663|gb|AAH48647.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28913663|gb|AAH48647.1|

Aligned organism(s): 15 entry(ies)

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Aligned organism(s): 15 entry(ies)

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               82-281, gnl|bosTau2|chr13 (62491982-62491772)
               

               
               82-281, gnl|canFam2|chr24 (42685037-42685352)
               

               
               82-281, gnl|dasNov1|scaffold_126945 (39562-39254)
               

               
               82-281, gnl|echTel1|scaffold_221796 (13568-13251)
               

               
               82-281, gnl|galGal2|chr20 (11947963-11947681)
               

               
               82-281, gnl|hg17|chr20 (51994553-51994869)
               

               
               82-281, gnl|Hg17|chr20 (51994946-51994736)
               

               
               82-281, gnl|loxAfr1|scaffold_6491 (8517-8200)
               

               
               82-281, gnl|mm7|chr2 (170140430-170140729)
               

               
               82-281, gnl|Mm7|chr2 (170140806-170140606)
               

               
               82-281, gnl|monDom2|scaffold_1 (166129975-166130284)
               

               
               82-281, gnl|oryCun1|scaffold_205113 (54284-54600)
               

               
               82-281, gnl|panTro1|chr21 (54771664-54771980)
               

               
               82-281, gnl|rheMac2|chr10 (10534088-10533772)
               

               
               82-281, gnl|rn3|chr3 (161301724-161302004)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               82-281, gnl|bosTau2|chr13 (62491982-62491772)
               

               
               82-281, gnl|canFam2|chr24 (42685037-42685352)
               

               
               82-281, gnl|dasNov1|scaffold_126945 (39562-39254)
               

               
               82-281, gnl|echTel1|scaffold_221796 (13568-13251)
               

               
               82-281, gnl|galGal2|chr20 (11947963-11947681)
               

               
               82-281, gnl|hg17|chr20 (51994553-51994869)
               

               
               82-281, gnl|Hg17|chr20 (51994946-51994736)
               

               
               82-281, gnl|loxAfr1|scaffold_6491 (8517-8200)
               

               
               82-281, gnl|mm7|chr2 (170140430-170140729)
               

               
               82-281, gnl|Mm7|chr2 (170140806-170140606)
               

               
               82-281, gnl|monDom2|scaffold_1 (166129975-166130284)
               

               
               82-281, gnl|oryCun1|scaffold_205113 (54284-54600)
               

               
               82-281, gnl|panTro1|chr21 (54771664-54771980)
               

               
               82-281, gnl|rheMac2|chr10 (10534088-10533772)
               

               
               82-281, gnl|rn3|chr3 (161301724-161302004)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	82-281, gnl\|bosTau2\|chr13 (62491982-62491772)
	82-281, gnl\|canFam2\|chr24 (42685037-42685352)
	82-281, gnl\|dasNov1\|scaffold_126945 (39562-39254)
	82-281, gnl\|echTel1\|scaffold_221796 (13568-13251)
	82-281, gnl\|galGal2\|chr20 (11947963-11947681)
	82-281, gnl\|hg17\|chr20 (51994553-51994869)
	82-281, gnl\|Hg17\|chr20 (51994946-51994736)
	82-281, gnl\|loxAfr1\|scaffold_6491 (8517-8200)
	82-281, gnl\|mm7\|chr2 (170140430-170140729)
	82-281, gnl\|Mm7\|chr2 (170140806-170140606)
	82-281, gnl\|monDom2\|scaffold_1 (166129975-166130284)
	82-281, gnl\|oryCun1\|scaffold_205113 (54284-54600)
	82-281, gnl\|panTro1\|chr21 (54771664-54771980)
	82-281, gnl\|rheMac2\|chr10 (10534088-10533772)
	82-281, gnl\|rn3\|chr3 (161301724-161302004)