Non-Coding RNA Search

rmas908b_k14.y1

Sequence:


               
               TTTTTTTTCCATTTAAATTAAACTTCCTTGAATGAAATAAAAAACAAAGGGTGCATTGCA
TAATATTTCGTGGTCACAGTATAAAACAATACAGTTAGATCATAGAACATCAGATATAGA
CAAAAATACACAAGACCCTTTCTCTGTCTATGGAACATTCGGCAGATCCTGATGTACCAC
ACTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTCCATTTAAATTAAACTTCCTTGAATGAAATAAAAAACAAAGGGTGCATTGCA
TAATATTTCGTGGTCACAGTATAAAACAATACAGTTAGATCATAGAACATCAGATATAGA
CAAAAATACACAAGACCCTTTCTCTGTCTATGGAACATTCGGCAGATCCTGATGTACCAC
ACTAAAAAAAAAAAAAAAAAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               7-197, gnl|bosTau2|chr3 (22060771-22060580)
               

               
               7-197, gnl|canFam2|chr17 (57453754-57454463)
               

               
               7-197, gnl|dasNov1|scaffold_10102 (38817-39504)
               

               
               7-197, gnl|echTel1|scaffold_312044 (118631-119383)
               

               
               7-197, gnl|hg17|chr1 (117244431-117245137)
               

               
               7-197, gnl|Hg17|chr1 (117245022-117244836)
               

               
               7-197, gnl|loxAfr1|scaffold_17343 (59969-59240)
               

               
               7-197, gnl|mm7|chr3 (100835604-100834934)
               

               
               7-197, gnl|Mm7|chr3 (100835045-100835236)
               

               
               7-197, gnl|monDom2|scaffold_82 (3103099-3103838)
               

               
               7-197, gnl|oryCun1|scaffold_203626 (161353-160634)
               

               
               7-197, gnl|panTro1|chr1 (117086460-117087169)
               

               
               7-197, gnl|rheMac2|chr1 (119961000-119961709)
               

               
               7-197, gnl|rn3|chr2 (196054836-196054139)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-197, gnl|bosTau2|chr3 (22060771-22060580)
               

               
               7-197, gnl|canFam2|chr17 (57453754-57454463)
               

               
               7-197, gnl|dasNov1|scaffold_10102 (38817-39504)
               

               
               7-197, gnl|echTel1|scaffold_312044 (118631-119383)
               

               
               7-197, gnl|hg17|chr1 (117244431-117245137)
               

               
               7-197, gnl|Hg17|chr1 (117245022-117244836)
               

               
               7-197, gnl|loxAfr1|scaffold_17343 (59969-59240)
               

               
               7-197, gnl|mm7|chr3 (100835604-100834934)
               

               
               7-197, gnl|Mm7|chr3 (100835045-100835236)
               

               
               7-197, gnl|monDom2|scaffold_82 (3103099-3103838)
               

               
               7-197, gnl|oryCun1|scaffold_203626 (161353-160634)
               

               
               7-197, gnl|panTro1|chr1 (117086460-117087169)
               

               
               7-197, gnl|rheMac2|chr1 (119961000-119961709)
               

               
               7-197, gnl|rn3|chr2 (196054836-196054139)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	7-197, gnl\|bosTau2\|chr3 (22060771-22060580)
	7-197, gnl\|canFam2\|chr17 (57453754-57454463)
	7-197, gnl\|dasNov1\|scaffold_10102 (38817-39504)
	7-197, gnl\|echTel1\|scaffold_312044 (118631-119383)
	7-197, gnl\|hg17\|chr1 (117244431-117245137)
	7-197, gnl\|Hg17\|chr1 (117245022-117244836)
	7-197, gnl\|loxAfr1\|scaffold_17343 (59969-59240)
	7-197, gnl\|mm7\|chr3 (100835604-100834934)
	7-197, gnl\|Mm7\|chr3 (100835045-100835236)
	7-197, gnl\|monDom2\|scaffold_82 (3103099-3103838)
	7-197, gnl\|oryCun1\|scaffold_203626 (161353-160634)
	7-197, gnl\|panTro1\|chr1 (117086460-117087169)
	7-197, gnl\|rheMac2\|chr1 (119961000-119961709)
	7-197, gnl\|rn3\|chr2 (196054836-196054139)