Non-Coding RNA Search

rmas909b_f17.y1

Sequence:


               
               CAGGCATAGATCCAGTGCCTGGAGCAGTCCTGCTCATCTCATATACTACATAAGCAAACG
AAACATCCAGCATCATCACATTTCCAGGAAATGCACCACAGGGCTGAGGGGGAAGATTTG
GCCTGTGGTTGATCTGACCCTTGGGAGAGAGGGTAACTTGATCTGTGACCTTGAGTAAAC
CATAACGCCCCCaaaaaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
a

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGCATAGATCCAGTGCCTGGAGCAGTCCTGCTCATCTCATATACTACATAAGCAAACG
AAACATCCAGCATCATCACATTTCCAGGAAATGCACCACAGGGCTGAGGGGGAAGATTTG
GCCTGTGGTTGATCTGACCCTTGGGAGAGAGGGTAACTTGATCTGTGACCTTGAGTAAAC
CATAACGCCCCCaaaaaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
a

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               3-190, gnl|bosTau2|chr5 (32539247-32539056)
               

               
               3-190, gnl|canFam2|chr10 (4259798-4260378)
               

               
               3-190, gnl|dasNov1|scaffold_24825 (5755-5256)
               

               
               3-190, gnl|hg17|chr12 (55825771-55826367)
               

               
               3-190, gnl|Hg17|chr12 (55826210-55826408)
               

               
               3-190, gnl|loxAfr1|scaffold_12975 (37319-36752)
               

               
               3-190, gnl|mm7|chr10 (127106631-127106063)
               

               
               3-190, gnl|Mm7|chr10 (127106206-127106028)
               

               
               3-190, gnl|panTro1|chr10 (57065344-57065939)
               

               
               3-190, gnl|rheMac2|chr11 (54213305-54213899)
               

               
               3-190, gnl|rn3|chr7 (67606985-67606419)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-190, gnl|bosTau2|chr5 (32539247-32539056)
               

               
               3-190, gnl|canFam2|chr10 (4259798-4260378)
               

               
               3-190, gnl|dasNov1|scaffold_24825 (5755-5256)
               

               
               3-190, gnl|hg17|chr12 (55825771-55826367)
               

               
               3-190, gnl|Hg17|chr12 (55826210-55826408)
               

               
               3-190, gnl|loxAfr1|scaffold_12975 (37319-36752)
               

               
               3-190, gnl|mm7|chr10 (127106631-127106063)
               

               
               3-190, gnl|Mm7|chr10 (127106206-127106028)
               

               
               3-190, gnl|panTro1|chr10 (57065344-57065939)
               

               
               3-190, gnl|rheMac2|chr11 (54213305-54213899)
               

               
               3-190, gnl|rn3|chr7 (67606985-67606419)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	3-190, gnl\|bosTau2\|chr5 (32539247-32539056)
	3-190, gnl\|canFam2\|chr10 (4259798-4260378)
	3-190, gnl\|dasNov1\|scaffold_24825 (5755-5256)
	3-190, gnl\|hg17\|chr12 (55825771-55826367)
	3-190, gnl\|Hg17\|chr12 (55826210-55826408)
	3-190, gnl\|loxAfr1\|scaffold_12975 (37319-36752)
	3-190, gnl\|mm7\|chr10 (127106631-127106063)
	3-190, gnl\|Mm7\|chr10 (127106206-127106028)
	3-190, gnl\|panTro1\|chr10 (57065344-57065939)
	3-190, gnl\|rheMac2\|chr11 (54213305-54213899)
	3-190, gnl\|rn3\|chr7 (67606985-67606419)