Non-Coding RNA Search

rmas917b_h2.y1

Sequence:


               
               AGGTGGGCATGAGCCCTGGTGGGCAAAGGCCACTTGCCTGCCAGGCCTGTGTGTGTGTTG
TGATGTGGGGGTGGGGGGTGGTAGCTAAGGAAAAAAATCCTCTCAGAATGAGTGTCTGGC
CCAGTACATACCAGTCATTCTTTTAATTAGTTTTTGTTTGATGAGCTGGCAGGAAGGGCA
TAGCGTGAAACAAAGATCCGTCAGATACTCATTTTGGGATTCCAAAAACCCACCTGCTTT
CTCCAATTTTTAAAGTTGGTTGGCATTGATATTTGTCTATTCATCCACCTGCTGTATCTC
CTCCTGGTGATGCCATCCATGCTTCTAAATAATTCTGCCATGAAACAGAAAAGATAAATG
AGAAGAGAGTTGTTCGACATCCCACGGGACGTTCTGGTGTCCCCAAACAGTGGTAACAAA
AGATTGCCCTCGTGTCAATATGTTAAGTACGTGTGGGCCAGGAGGACCTGGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTGGGCATGAGCCCTGGTGGGCAAAGGCCACTTGCCTGCCAGGCCTGTGTGTGTGTTG
TGATGTGGGGGTGGGGGGTGGTAGCTAAGGAAAAAAATCCTCTCAGAATGAGTGTCTGGC
CCAGTACATACCAGTCATTCTTTTAATTAGTTTTTGTTTGATGAGCTGGCAGGAAGGGCA
TAGCGTGAAACAAAGATCCGTCAGATACTCATTTTGGGATTCCAAAAACCCACCTGCTTT
CTCCAATTTTTAAAGTTGGTTGGCATTGATATTTGTCTATTCATCCACCTGCTGTATCTC
CTCCTGGTGATGCCATCCATGCTTCTAAATAATTCTGCCATGAAACAGAAAAGATAAATG
AGAAGAGAGTTGTTCGACATCCCACGGGACGTTCTGGTGTCCCCAAACAGTGGTAACAAA
AGATTGCCCTCGTGTCAATATGTTAAGTACGTGTGGGCCAGGAGGACCTGGGCT

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               5-472, gnl|bosTau2|chr13 (9629041-9629506)
               

               
               5-472, gnl|canFam2|chr2 (5789615-5788843)
               

               
               5-472, gnl|dasNov1|scaffold_2190 (16694-15982)
               

               
               5-472, gnl|echTel1|scaffold_291616 (147074-146313)
               

               
               5-472, gnl|galGal2|chr2 (12918753-12918009)
               

               
               5-472, gnl|hg17|chr10 (34438666-34439369)
               

               
               5-472, gnl|Hg17|chr10 (34439356-34438922)
               

               
               5-472, gnl|loxAfr1|scaffold_1972 (65909-65180)
               

               
               5-472, gnl|mm7|chr8 (126220356-126219665)
               

               
               5-472, gnl|monDom2|scaffold_7 (34260797-34259984)
               

               
               5-472, gnl|panTro1|chr8 (34859143-34859846)
               

               
               5-472, gnl|rheMac2|chr9 (34295130-34295833)
               

               
               5-472, gnl|rn3|chr19 (57608347-57607658)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-472, gnl|bosTau2|chr13 (9629041-9629506)
               

               
               5-472, gnl|canFam2|chr2 (5789615-5788843)
               

               
               5-472, gnl|dasNov1|scaffold_2190 (16694-15982)
               

               
               5-472, gnl|echTel1|scaffold_291616 (147074-146313)
               

               
               5-472, gnl|galGal2|chr2 (12918753-12918009)
               

               
               5-472, gnl|hg17|chr10 (34438666-34439369)
               

               
               5-472, gnl|Hg17|chr10 (34439356-34438922)
               

               
               5-472, gnl|loxAfr1|scaffold_1972 (65909-65180)
               

               
               5-472, gnl|mm7|chr8 (126220356-126219665)
               

               
               5-472, gnl|monDom2|scaffold_7 (34260797-34259984)
               

               
               5-472, gnl|panTro1|chr8 (34859143-34859846)
               

               
               5-472, gnl|rheMac2|chr9 (34295130-34295833)
               

               
               5-472, gnl|rn3|chr19 (57608347-57607658)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	5-472, gnl\|bosTau2\|chr13 (9629041-9629506)
	5-472, gnl\|canFam2\|chr2 (5789615-5788843)
	5-472, gnl\|dasNov1\|scaffold_2190 (16694-15982)
	5-472, gnl\|echTel1\|scaffold_291616 (147074-146313)
	5-472, gnl\|galGal2\|chr2 (12918753-12918009)
	5-472, gnl\|hg17\|chr10 (34438666-34439369)
	5-472, gnl\|Hg17\|chr10 (34439356-34438922)
	5-472, gnl\|loxAfr1\|scaffold_1972 (65909-65180)
	5-472, gnl\|mm7\|chr8 (126220356-126219665)
	5-472, gnl\|monDom2\|scaffold_7 (34260797-34259984)
	5-472, gnl\|panTro1\|chr8 (34859143-34859846)
	5-472, gnl\|rheMac2\|chr9 (34295130-34295833)
	5-472, gnl\|rn3\|chr19 (57608347-57607658)