rmas927b_a10.y1
               |  | CAGGATTCAGTCTTAGCTGCAACTGTGATTTATGCTGCAGCTGTGTCAATGCTGGATCCT
TTACCCATTGCACCAGGTTGGGGATCAAACCTGTGCTTGCACAGTGACCTAAGCCTCTAC
AGTCAGTTTCTTTATAATGACTTTTATTTTTTCTGCTATAGTCAGATTCTTAACCTACTG
TGCCACAGTGGGAACTCCAGCATTTCCTTTTTTTTTGCTGGAGGATGGAACAAGCCAATA
AGTGTTCATTTTATCTGAAATGATTAGATATGTTATGAAATTTCCATCCAGCATAATCTA
TGAATTGGCTATTTGTGGCAAATAGTGTTTTGAGTGATTCAGAGTTACCATTTACAGCAT
AGATGGATTACTAGTTTTCAGAGTTAGAATGTAGTAAAAATGAagttcccattgtggctt
agtggtaatgaacctgactggcatccatgaggacgctggttcagtccctggccccactca
gtgggttaaagatccagcattgccgtgagctgtggtgtaggtcacagacgaagcttggat
cTGATGCT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CAGGATTCAGTCTTAGCTGCAACTGTGATTTATGCTGCAGCTGTGTCAATGCTGGATCCT
TTACCCATTGCACCAGGTTGGGGATCAAACCTGTGCTTGCACAGTGACCTAAGCCTCTAC
AGTCAGTTTCTTTATAATGACTTTTATTTTTTCTGCTATAGTCAGATTCTTAACCTACTG
TGCCACAGTGGGAACTCCAGCATTTCCTTTTTTTTTGCTGGAGGATGGAACAAGCCAATA
AGTGTTCATTTTATCTGAAATGATTAGATATGTTATGAAATTTCCATCCAGCATAATCTA
TGAATTGGCTATTTGTGGCAAATAGTGTTTTGAGTGATTCAGAGTTACCATTTACAGCAT
AGATGGATTACTAGTTTTCAGAGTTAGAATGTAGTAAAAATGAagttcccattgtggctt
agtggtaatgaacctgactggcatccatgaggacgctggttcagtccctggccccactca
gtgggttaaagatccagcattgccgtgagctgtggtgtaggtcacagacgaagcttggat
cTGATGCT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map