Non-Coding RNA Search

rmas927b_k12.y1

Sequence:


               
               CGAGTTTTTTTTTTTTTTTTTTTTTGCATATGCTGGCATTCTGCCTGCAATATTTTCTCT
TTCCATTTTGTGAATACCAATCTGGGAACTCAGACCAAGTGGAATCTCTGCTGTGAAGCC
TTTGAGACACTTCCAGTCAGTCTCTGTGCCTCCTGTAATAACAATAATACTAATAACAGG
TAATATTTATTGAATGCTCATTATTTCCCAAGCTTAAGCAATTTTAAGTATTTATTTCAT
TTAATACCTATAATTACTCTATATGATGTTTTATTTTCCTCACTTTTTAAGCTAAGGTTC
CCCTCGTGCCGAATTCGGCACGAGgagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagagagagag

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTTTTTTTTTTTTTTTTTTTTTGCATATGCTGGCATTCTGCCTGCAATATTTTCTCT
TTCCATTTTGTGAATACCAATCTGGGAACTCAGACCAAGTGGAATCTCTGCTGTGAAGCC
TTTGAGACACTTCCAGTCAGTCTCTGTGCCTCCTGTAATAACAATAATACTAATAACAGG
TAATATTTATTGAATGCTCATTATTTCCCAAGCTTAAGCAATTTTAAGTATTTATTTCAT
TTAATACCTATAATTACTCTATATGATGTTTTATTTTCCTCACTTTTTAAGCTAAGGTTC
CCCTCGTGCCGAATTCGGCACGAGgagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagagagagag

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               56-168, gnl|bosTau2|chr2 (85406223-85406112)
               

               
               56-168, gnl|dasNov1|scaffold_429 (107689-108061)
               

               
               56-168, gnl|hg17|chr1 (21037232-21037574)
               

               
               56-168, gnl|Hg17|chr1 (21037450-21037559)
               

               
               56-168, gnl|loxAfr1|scaffold_650 (91800-91443)
               

               
               56-168, gnl|oryCun1|scaffold_214404 (129146-129501)
               

               
               56-168, gnl|panTro1|chr1 (21359554-21359896)
               

               
               56-168, gnl|rheMac2|chr1 (23626956-23627289)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-168, gnl|bosTau2|chr2 (85406223-85406112)
               

               
               56-168, gnl|dasNov1|scaffold_429 (107689-108061)
               

               
               56-168, gnl|hg17|chr1 (21037232-21037574)
               

               
               56-168, gnl|Hg17|chr1 (21037450-21037559)
               

               
               56-168, gnl|loxAfr1|scaffold_650 (91800-91443)
               

               
               56-168, gnl|oryCun1|scaffold_214404 (129146-129501)
               

               
               56-168, gnl|panTro1|chr1 (21359554-21359896)
               

               
               56-168, gnl|rheMac2|chr1 (23626956-23627289)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	56-168, gnl\|bosTau2\|chr2 (85406223-85406112)
	56-168, gnl\|dasNov1\|scaffold_429 (107689-108061)
	56-168, gnl\|hg17\|chr1 (21037232-21037574)
	56-168, gnl\|Hg17\|chr1 (21037450-21037559)
	56-168, gnl\|loxAfr1\|scaffold_650 (91800-91443)
	56-168, gnl\|oryCun1\|scaffold_214404 (129146-129501)
	56-168, gnl\|panTro1\|chr1 (21359554-21359896)
	56-168, gnl\|rheMac2\|chr1 (23626956-23627289)