Non-Coding RNA Search

rmcp10c_n14.y1

Sequence:


               
               GCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCCAAAGTTCTGATGGCACCACCTTC
CATGGTTAGCACTGAGCAGCGCCAGCATGCTGAGCACATATTCTTATCGTTTAGGAAATC
AAAGTCACCATTCGCAGTTTGCAAGCATATTTTGGAAACCAGCAAGGTGGACTACGTGCT
CTTCCAGGCCGCCACGGCCGTCATGGAGGCCGTCGTCCGCGAGTGGATCCTGCTGGAGAA
GGGCAGCATCGAGTCCCTGCGCACATTCCTCCTCACCTACGTCTTACAGAGGCCCAACCT
CCAAAAGTATGTTCGGGAACAGATTCTATTAGCAGTAGCAGTAATTGTAAAACGAGGATC
GTTAGATAAATCAATTGACTGCCAAAGCATTTTTCATGAAGTCAGCCAGTTGATAAGTAG
TGGCAACCCCACTGTGCAAACTTGGGCCTGTTCTATTCTAACTGCACTCTTGAGTGAATT
CTCAAGTTCAAGCAAAACTAGCAACATTGGACTGAGTATGGAATTCCATGGCAACTGCAA
AAGAGTTTTTCAGGAAGAAGACCTGCGCCAGATTTTCCTGTTGACCGTGGGAGTCCTTCA
GGAGTTCAGCAGGCGCGAGAGCCTCAGCGCCCAGATGTCGTCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCCCAGAAGTGATCGCTCAGCTGGAGAACGCGGCCAAAGTTCTGATGGCACCACCTTC
CATGGTTAGCACTGAGCAGCGCCAGCATGCTGAGCACATATTCTTATCGTTTAGGAAATC
AAAGTCACCATTCGCAGTTTGCAAGCATATTTTGGAAACCAGCAAGGTGGACTACGTGCT
CTTCCAGGCCGCCACGGCCGTCATGGAGGCCGTCGTCCGCGAGTGGATCCTGCTGGAGAA
GGGCAGCATCGAGTCCCTGCGCACATTCCTCCTCACCTACGTCTTACAGAGGCCCAACCT
CCAAAAGTATGTTCGGGAACAGATTCTATTAGCAGTAGCAGTAATTGTAAAACGAGGATC
GTTAGATAAATCAATTGACTGCCAAAGCATTTTTCATGAAGTCAGCCAGTTGATAAGTAG
TGGCAACCCCACTGTGCAAACTTGGGCCTGTTCTATTCTAACTGCACTCTTGAGTGAATT
CTCAAGTTCAAGCAAAACTAGCAACATTGGACTGAGTATGGAATTCCATGGCAACTGCAA
AAGAGTTTTTCAGGAAGAAGACCTGCGCCAGATTTTCCTGTTGACCGTGGGAGTCCTTCA
GGAGTTCAGCAGGCGCGAGAGCCTCAGCGCCCAGATGTCGTCCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55667789|ref|XP_520904.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55667789|ref|XP_520904.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               155-294, gnl|bosTau2|chr12 (19753697-19753836)
               

               
               155-294, gnl|Hg17|chr13 (20334998-20334859)
               

               
               155-294, gnl|Mm7|chr14 (52511145-52511006)
               


               
               295-436, gnl|bosTau2|chr12 (19757593-19757734)
               

               
               295-436, gnl|Hg17|chr13 (20327907-20327766)
               

               
               295-436, gnl|Mm7|chr14 (52506281-52506140)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               155-294, gnl|bosTau2|chr12 (19753697-19753836)
               

               
               155-294, gnl|Hg17|chr13 (20334998-20334859)
               

               
               155-294, gnl|Mm7|chr14 (52511145-52511006)
               


               
               295-436, gnl|bosTau2|chr12 (19757593-19757734)
               

               
               295-436, gnl|Hg17|chr13 (20327907-20327766)
               

               
               295-436, gnl|Mm7|chr14 (52506281-52506140)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	155-294, gnl\|bosTau2\|chr12 (19753697-19753836)
	155-294, gnl\|Hg17\|chr13 (20334998-20334859)
	155-294, gnl\|Mm7\|chr14 (52511145-52511006)

	295-436, gnl\|bosTau2\|chr12 (19757593-19757734)
	295-436, gnl\|Hg17\|chr13 (20327907-20327766)
	295-436, gnl\|Mm7\|chr14 (52506281-52506140)