rmcp14c_n15.y1
|
CATCACCCTGAAAATCATCCCAGCCACCCAAGAGGAGGACCTGCTTGAAGGACAGCAAGG
TGTTCATGCGGGCTCTCTTCCACTACGACCCCCGGGAAGACCGGGCCATTCCCTGCCAGG
AGGCAGGGCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGTGAGCCAGGATGACCCCA
CGTGGTGGCAAGCCAAGCGAGTGGGGGACACCAACCTTCGAGCTGGCCTCATCCCCTCCA
AGCAGTTCCAGGAAAGGCGACTAAGCTACTGGAGAGCCACGGGCACCCTGCCGAGTCCCC
AGAGCCTCAAGAAGCCGCCCTGTGAGTGGACTGGAAGGATGGCCCTTCGGGGAAGGCAGT
TCAGGGTGGGCTGGGGTTAGGAGTTGGGGGCCCTCGTGTGGGTAAGAAGCGGGCACTGGG
CCGGAGGGGGCATTGGGGTGTCATCTGAGCTCACAGGCCTCTTGAGGCGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CATCACCCTGAAAATCATCCCAGCCACCCAAGAGGAGGACCTGCTTGAAGGACAGCAAGG
TGTTCATGCGGGCTCTCTTCCACTACGACCCCCGGGAAGACCGGGCCATTCCCTGCCAGG
AGGCAGGGCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGTGAGCCAGGATGACCCCA
CGTGGTGGCAAGCCAAGCGAGTGGGGGACACCAACCTTCGAGCTGGCCTCATCCCCTCCA
AGCAGTTCCAGGAAAGGCGACTAAGCTACTGGAGAGCCACGGGCACCCTGCCGAGTCCCC
AGAGCCTCAAGAAGCCGCCCTGTGAGTGGACTGGAAGGATGGCCCTTCGGGGAAGGCAGT
TCAGGGTGGGCTGGGGTTAGGAGTTGGGGGCCCTCGTGTGGGTAAGAAGCGGGCACTGGG
CCGGAGGGGGCATTGGGGTGTCATCTGAGCTCACAGGCCTCTTGAGGCGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
58-257, gnl|bosTau2|chr19 (38417089-38417288) |
|
58-257, gnl|canFam2|chr9 (22809504-22809286) |
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58-257, gnl|danRer3|chr3 (35284562-35284349) |
|
58-257, gnl|dasNov1|scaffold_198898 (254-471) |
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58-257, gnl|echTel1|scaffold_309003 (2194-1976) |
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58-257, gnl|fr1|chrUn (279299502-279299714) |
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58-257, gnl|galGal2|chrUn (45712064-45711854) |
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58-257, gnl|hg17|chr17 (39253743-39253961) |
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58-257, gnl|Hg17|chr17 (39253954-39253755) |
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58-257, gnl|loxAfr1|scaffold_2421 (95500-95282) |
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58-257, gnl|mm7|chr11 (102122341-102122559) |
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58-257, gnl|Mm7|chr11 (102122552-102122353) |
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58-257, gnl|monDom2|scaffold_18 (54337809-54338027) |
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58-257, gnl|oryCun1|scaffold_139225 (7205-7423) |
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58-257, gnl|panTro1|chr19 (42438995-42439213) |
|
58-257, gnl|rheMac2|chr16 (53848511-53848729) |
|
58-257, gnl|rn3|chr10 (91087284-91087502) |
|
58-257, gnl|tetNig1|chr2 (5660893-5661094) |
|
58-257, gnl|xenTro1|scaffold_42 (387335-387129) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
58-257, gnl|bosTau2|chr19 (38417089-38417288) |
|
58-257, gnl|canFam2|chr9 (22809504-22809286) |
|
58-257, gnl|danRer3|chr3 (35284562-35284349) |
|
58-257, gnl|dasNov1|scaffold_198898 (254-471) |
|
58-257, gnl|echTel1|scaffold_309003 (2194-1976) |
|
58-257, gnl|fr1|chrUn (279299502-279299714) |
|
58-257, gnl|galGal2|chrUn (45712064-45711854) |
|
58-257, gnl|hg17|chr17 (39253743-39253961) |
|
58-257, gnl|Hg17|chr17 (39253954-39253755) |
|
58-257, gnl|loxAfr1|scaffold_2421 (95500-95282) |
|
58-257, gnl|mm7|chr11 (102122341-102122559) |
|
58-257, gnl|Mm7|chr11 (102122552-102122353) |
|
58-257, gnl|monDom2|scaffold_18 (54337809-54338027) |
|
58-257, gnl|oryCun1|scaffold_139225 (7205-7423) |
|
58-257, gnl|panTro1|chr19 (42438995-42439213) |
|
58-257, gnl|rheMac2|chr16 (53848511-53848729) |
|
58-257, gnl|rn3|chr10 (91087284-91087502) |
|
58-257, gnl|tetNig1|chr2 (5660893-5661094) |
|
58-257, gnl|xenTro1|scaffold_42 (387335-387129) |
