Non-Coding RNA Search

rmcp20c_h8.y1

Sequence:


               
               CTGGCTAAGGAGGAGGCGCCATCATGGGAGTTGACATCCGCCACAACAAGGACCGAAAGG
TTCGACGCAAGGAGCCCAAGAGCCAGGACATCTACCTGAGGCTGCTGGTCAAGCTGTACA
GGTTTCTGGCCAGACGAACCAACTCCACCTTCAATCAAGTTGTGCTGAAGAGGTTGTTCA
TGAGTCGCACCAACCGGCCACCCCTGTCGCTTTCCCGGATGATCCGGAAGATGAAGCTTC
CTGGCCGGGAAGGCAAGACCGCTGTGGTCGTAGGGACTATAACCGATGACGTGCGTGTCC
AGGAGGTGCCCAAATTGAAGGTGTGCGCTCTGCGCGTGAGCAGCCGTGCCCGGAGCCGCA
TTCTCAAGGCCGGGGGCAAAATCCTCACCTTCGACCAGTTGGCCCTGGACTCCCCCAAAG
GCTGTGGCACTGTCCTCCTCTCTGGGCCTCGCAAGGGCCGCGAGGTGTACAGGCATTTCG
GCAAGGCCCCAGGGACCCCGCACAGCCACACCAAACCCTATGTTCGCTCCAAGGGCCGGA
AGTTCGAGCGCGCCAGAGGCCGACGTGCCAGCCGCGGCTACAAAAACTAACCCCAGAGCC
TGCCTTGTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCTAAGGAGGAGGCGCCATCATGGGAGTTGACATCCGCCACAACAAGGACCGAAAGG
TTCGACGCAAGGAGCCCAAGAGCCAGGACATCTACCTGAGGCTGCTGGTCAAGCTGTACA
GGTTTCTGGCCAGACGAACCAACTCCACCTTCAATCAAGTTGTGCTGAAGAGGTTGTTCA
TGAGTCGCACCAACCGGCCACCCCTGTCGCTTTCCCGGATGATCCGGAAGATGAAGCTTC
CTGGCCGGGAAGGCAAGACCGCTGTGGTCGTAGGGACTATAACCGATGACGTGCGTGTCC
AGGAGGTGCCCAAATTGAAGGTGTGCGCTCTGCGCGTGAGCAGCCGTGCCCGGAGCCGCA
TTCTCAAGGCCGGGGGCAAAATCCTCACCTTCGACCAGTTGGCCCTGGACTCCCCCAAAG
GCTGTGGCACTGTCCTCCTCTCTGGGCCTCGCAAGGGCCGCGAGGTGTACAGGCATTTCG
GCAAGGCCCCAGGGACCCCGCACAGCCACACCAAACCCTATGTTCGCTCCAAGGGCCGGA
AGTTCGAGCGCGCCAGAGGCCGACGTGCCAGCCGCGGCTACAAAAACTAACCCCAGAGCC
TGCCTTGTTATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62752012|ref|NP_001015556.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62752012|ref|NP_001015556.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               102-221, gnl|bosTau2|chr18 (50559272-50559391)
               

               
               102-221, gnl|Hg17|chr19 (53812504-53812385)
               


               
               286-612, gnl|bosTau2|chr13 (54360584-54360916)
               

               
               286-612, gnl|Hg17|chr16 (74826756-74826432)
               

               
               286-612, gnl|Mm7|chr6 (128336874-128337183)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-221, gnl|bosTau2|chr18 (50559272-50559391)
               

               
               102-221, gnl|Hg17|chr19 (53812504-53812385)
               


               
               286-612, gnl|bosTau2|chr13 (54360584-54360916)
               

               
               286-612, gnl|Hg17|chr16 (74826756-74826432)
               

               
               286-612, gnl|Mm7|chr6 (128336874-128337183)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	102-221, gnl\|bosTau2\|chr18 (50559272-50559391)
	102-221, gnl\|Hg17\|chr19 (53812504-53812385)

	286-612, gnl\|bosTau2\|chr13 (54360584-54360916)
	286-612, gnl\|Hg17\|chr16 (74826756-74826432)
	286-612, gnl\|Mm7\|chr6 (128336874-128337183)