Non-Coding RNA Search

rmcp35c_k12.y1

Sequence:


               
               TTTTGAAAAGAGTATCTTTTAAAGGACTGAGTTCATTCAATATACTCTCTTTTAGACTTT
CCTCTGAACAATTTTCTATAACTATTTCATTTATGGAATTAATGAAGAAATAAATTTTAA
GCATATATCTAATGCCAAAAATAATACAAAACTTCCTAGAACAAAACAAAACAAAATAAG
CAGCCACTAATGGGAGGTCCCAAGGAAATAAAGTACAGATTTAAATTTGCTCCAAATCCC
AGTACAATTCAAGCTAAACAGAAAGTTGAAAGTACCCAAGATCCTTTTGCTTAAGCAAAA
TTTTCTGATAATCTGTTGAATGTGGTTAGATCAATGCAAAATTGCATCCTCTCCTGCTGA
CATGTTTTGTTTATTACCATACATGCTTTTTATTAATGATGTCAATATTTAGGACTTGTT
CTGTTTGTGCCCCAATTTCATTTATTTTTTTGGCTGGTATGAACCTGTAACATTTTTAAA
GAAAATGTCAAGACAAAAGTGTTTTAATCATTTACTTCCTAGGAGATAGTGCATGTATAG
ACACTCCCTACATACTTGCTGACTGTCTAAAAGGGAAATTCACTTCTGAATGAAATTCTG
ACATGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGAAAAGAGTATCTTTTAAAGGACTGAGTTCATTCAATATACTCTCTTTTAGACTTT
CCTCTGAACAATTTTCTATAACTATTTCATTTATGGAATTAATGAAGAAATAAATTTTAA
GCATATATCTAATGCCAAAAATAATACAAAACTTCCTAGAACAAAACAAAACAAAATAAG
CAGCCACTAATGGGAGGTCCCAAGGAAATAAAGTACAGATTTAAATTTGCTCCAAATCCC
AGTACAATTCAAGCTAAACAGAAAGTTGAAAGTACCCAAGATCCTTTTGCTTAAGCAAAA
TTTTCTGATAATCTGTTGAATGTGGTTAGATCAATGCAAAATTGCATCCTCTCCTGCTGA
CATGTTTTGTTTATTACCATACATGCTTTTTATTAATGATGTCAATATTTAGGACTTGTT
CTGTTTGTGCCCCAATTTCATTTATTTTTTTGGCTGGTATGAACCTGTAACATTTTTAAA
GAAAATGTCAAGACAAAAGTGTTTTAATCATTTACTTCCTAGGAGATAGTGCATGTATAG
ACACTCCCTACATACTTGCTGACTGTCTAAAAGGGAAATTCACTTCTGAATGAAATTCTG
ACATGCCC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               54-218, gnl|bosTau2|chr1 (72278270-72278101)
               


               
               317-604, gnl|bosTau2|chr1 (72277425-72277148)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-218, gnl|bosTau2|chr1 (72278270-72278101)
               


               
               317-604, gnl|bosTau2|chr1 (72277425-72277148)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	54-218, gnl\|bosTau2\|chr1 (72278270-72278101)

	317-604, gnl\|bosTau2\|chr1 (72277425-72277148)