Non-Coding RNA Search

rmed05c_h12.y1

Sequence:


               
               TCCGGGATTTGCAGAAGTCCTGTGATTTTTCCCCTCTCGGCAATTTACACACGCACACAC
ACGCGCGGGCACGGACATGGATTTCTATCCGCGGGGCCGCTTCACGCCTCCACGGGAGAG
AGACAGGGACCGGGGGCCGGTGGACGAGCCGGGGACGGGGACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGGGATTTGCAGAAGTCCTGTGATTTTTCCCCTCTCGGCAATTTACACACGCACACAC
ACGCGCGGGCACGGACATGGATTTCTATCCGCGGGGCCGCTTCACGCCTCCACGGGAGAG
AGACAGGGACCGGGGGCCGGTGGACGAGCCGGGGACGGGGACAG

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               3-160, gnl|bosTau2|chr24 (44825890-44826047)
               

               
               3-160, gnl|canFam2|chr1 (16743138-16742647)
               

               
               3-160, gnl|hg17|chr18 (59137433-59137940)
               

               
               3-160, gnl|Hg17|chr18 (59137685-59137844)
               

               
               3-160, gnl|loxAfr1|scaffold_5987 (33407-33887)
               

               
               3-160, gnl|mm7|chr1 (106613301-106613836)
               

               
               3-160, gnl|Mm7|chr1 (106613570-106613728)
               

               
               3-160, gnl|monDom2|scaffold_4 (67276766-67277309)
               

               
               3-160, gnl|panTro1|chr17 (55969266-55969777)
               

               
               3-160, gnl|rheMac2|chr18 (56700402-56700907)
               

               
               3-160, gnl|rn3|chr13 (12905432-12905971)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-160, gnl|bosTau2|chr24 (44825890-44826047)
               

               
               3-160, gnl|canFam2|chr1 (16743138-16742647)
               

               
               3-160, gnl|hg17|chr18 (59137433-59137940)
               

               
               3-160, gnl|Hg17|chr18 (59137685-59137844)
               

               
               3-160, gnl|loxAfr1|scaffold_5987 (33407-33887)
               

               
               3-160, gnl|mm7|chr1 (106613301-106613836)
               

               
               3-160, gnl|Mm7|chr1 (106613570-106613728)
               

               
               3-160, gnl|monDom2|scaffold_4 (67276766-67277309)
               

               
               3-160, gnl|panTro1|chr17 (55969266-55969777)
               

               
               3-160, gnl|rheMac2|chr18 (56700402-56700907)
               

               
               3-160, gnl|rn3|chr13 (12905432-12905971)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	3-160, gnl\|bosTau2\|chr24 (44825890-44826047)
	3-160, gnl\|canFam2\|chr1 (16743138-16742647)
	3-160, gnl\|hg17\|chr18 (59137433-59137940)
	3-160, gnl\|Hg17\|chr18 (59137685-59137844)
	3-160, gnl\|loxAfr1\|scaffold_5987 (33407-33887)
	3-160, gnl\|mm7\|chr1 (106613301-106613836)
	3-160, gnl\|Mm7\|chr1 (106613570-106613728)
	3-160, gnl\|monDom2\|scaffold_4 (67276766-67277309)
	3-160, gnl\|panTro1\|chr17 (55969266-55969777)
	3-160, gnl\|rheMac2\|chr18 (56700402-56700907)
	3-160, gnl\|rn3\|chr13 (12905432-12905971)