rmed07c_a17.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTTATCATTGATACTTTCGCTGATCTCAGAAGTGAAAAACAGAAAAAAGAAGAAATTC TAAAGACAACCTGCTTCATCTGTGGACTCGAGAGGGACAAGTTTGATAACAAAACGGTTT CTTTTGAGGAGCACATCAAGTCAGAACACAATATGTGGCATTATTTGTACTTCCTAGTTC TGGTGAAGGTTAAAGATCCAACGGAATACACTGGACCTGAAAGTTACGTGGCTCAAATGA TTGTGGAGAAGAATTTGGACTGGTTTCCTCGGATGCGAGCCATGTCCCTTGTTAGCAACG AAGGTGACAGCGAGCAAAATGAGATTCGGAACCTGCAGGAGAAGTTGGAATCCACTATGA GTCTGGTCAAGCAGCTGTCCGGTCAGCTGGCGGAGCTAAAGGAGCAGATGACAGAACAAA GGAAGAATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTTATCATTGATACTTTCGCTGATCTCAGAAGTGAAAAACAGAAAAAAGAAGAAATTC TAAAGACAACCTGCTTCATCTGTGGACTCGAGAGGGACAAGTTTGATAACAAAACGGTTT CTTTTGAGGAGCACATCAAGTCAGAACACAATATGTGGCATTATTTGTACTTCCTAGTTC TGGTGAAGGTTAAAGATCCAACGGAATACACTGGACCTGAAAGTTACGTGGCTCAAATGA TTGTGGAGAAGAATTTGGACTGGTTTCCTCGGATGCGAGCCATGTCCCTTGTTAGCAACG AAGGTGACAGCGAGCAAAATGAGATTCGGAACCTGCAGGAGAAGTTGGAATCCACTATGA GTCTGGTCAAGCAGCTGTCCGGTCAGCTGGCGGAGCTAAAGGAGCAGATGACAGAACAAA GGAAGAATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 71-241, gnl|bosTau2|chr22 (17026694-17026864) | |
| 71-241, gnl|canFam2|chr20 (15775489-15775282) | |
| 71-241, gnl|danRer3|chr6 (20297387-20297190) | |
| 71-241, gnl|dasNov1|scaffold_344 (189349-189574) | |
| 71-241, gnl|echTel1|scaffold_320874 (41069-41292) | |
| 71-241, gnl|fr1|chrUn (146468829-146469010) | |
| 71-241, gnl|galGal2|chr12 (18461338-18461533) | |
| 71-241, gnl|hg17|chr3 (4834741-4834967) | |
| 71-241, gnl|Hg17|chr3 (4834751-4834922) | |
| 71-241, gnl|loxAfr1|scaffold_1409 (15645-15871) | |
| 71-241, gnl|mm7|chr6 (108617301-108617522) | |
| 71-241, gnl|Mm7|chr6 (108617311-108617482) | |
| 71-241, gnl|monDom2|scaffold_5 (30526195-30526401) | |
| 71-241, gnl|oryCun1|scaffold_103228 (1051-1216) | |
| 71-241, gnl|panTro1|chr2 (4953878-4954104) | |
| 71-241, gnl|rheMac2|chr2 (56209467-56209245) | |
| 71-241, gnl|rn3|chr4 (144247205-144247421) | |
| 71-241, gnl|tetNig1|chr11 (9482380-9482189) | |
| 71-241, gnl|xenTro1|scaffold_173 (1800607-1800790) | |
| 245-416, gnl|bosTau2|chr22 (17046097-17046267) | |
| 245-416, gnl|canFam2|chr20 (15757787-15757598) | |
| 245-416, gnl|danRer3|chr6 (20295752-20295587) | |
| 245-416, gnl|dasNov1|scaffold_7026 (89719-89891) | |
| 245-416, gnl|echTel1|scaffold_320874 (65899-66083) | |
| 245-416, gnl|fr1|chrUn (146469579-146469744) | |
| 245-416, gnl|galGal2|chr12 (18472678-18472855) | |
| 245-416, gnl|hg17|chr3 (4853437-4853626) | |
| 245-416, gnl|Hg17|chr3 (4853457-4853627) | |
| 245-416, gnl|loxAfr1|scaffold_1409 (39154-39345) | |
| 245-416, gnl|mm7|chr6 (108635930-108636109) | |
| 245-416, gnl|Mm7|chr6 (108635940-108636110) | |
| 245-416, gnl|monDom2|scaffold_5 (30553730-30553919) | |
| 245-416, gnl|oryCun1|scaffold_206095 (112340-112525) | |
| 245-416, gnl|panTro1|chr2 (4973029-4973217) | |
| 245-416, gnl|rheMac2|chr2 (56190889-56190706) | |
| 245-416, gnl|rn3|chr4 (144265680-144265859) | |
| 245-416, gnl|tetNig1|chr11 (9479622-9479453) | |
| 245-416, gnl|xenTro1|scaffold_173 (1806111-1806301) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 71-241, gnl|bosTau2|chr22 (17026694-17026864) | |
| 71-241, gnl|canFam2|chr20 (15775489-15775282) | |
| 71-241, gnl|danRer3|chr6 (20297387-20297190) | |
| 71-241, gnl|dasNov1|scaffold_344 (189349-189574) | |
| 71-241, gnl|echTel1|scaffold_320874 (41069-41292) | |
| 71-241, gnl|fr1|chrUn (146468829-146469010) | |
| 71-241, gnl|galGal2|chr12 (18461338-18461533) | |
| 71-241, gnl|hg17|chr3 (4834741-4834967) | |
| 71-241, gnl|Hg17|chr3 (4834751-4834922) | |
| 71-241, gnl|loxAfr1|scaffold_1409 (15645-15871) | |
| 71-241, gnl|mm7|chr6 (108617301-108617522) | |
| 71-241, gnl|Mm7|chr6 (108617311-108617482) | |
| 71-241, gnl|monDom2|scaffold_5 (30526195-30526401) | |
| 71-241, gnl|oryCun1|scaffold_103228 (1051-1216) | |
| 71-241, gnl|panTro1|chr2 (4953878-4954104) | |
| 71-241, gnl|rheMac2|chr2 (56209467-56209245) | |
| 71-241, gnl|rn3|chr4 (144247205-144247421) | |
| 71-241, gnl|tetNig1|chr11 (9482380-9482189) | |
| 71-241, gnl|xenTro1|scaffold_173 (1800607-1800790) | |
| 245-416, gnl|bosTau2|chr22 (17046097-17046267) | |
| 245-416, gnl|canFam2|chr20 (15757787-15757598) | |
| 245-416, gnl|danRer3|chr6 (20295752-20295587) | |
| 245-416, gnl|dasNov1|scaffold_7026 (89719-89891) | |
| 245-416, gnl|echTel1|scaffold_320874 (65899-66083) | |
| 245-416, gnl|fr1|chrUn (146469579-146469744) | |
| 245-416, gnl|galGal2|chr12 (18472678-18472855) | |
| 245-416, gnl|hg17|chr3 (4853437-4853626) | |
| 245-416, gnl|Hg17|chr3 (4853457-4853627) | |
| 245-416, gnl|loxAfr1|scaffold_1409 (39154-39345) | |
| 245-416, gnl|mm7|chr6 (108635930-108636109) | |
| 245-416, gnl|Mm7|chr6 (108635940-108636110) | |
| 245-416, gnl|monDom2|scaffold_5 (30553730-30553919) | |
| 245-416, gnl|oryCun1|scaffold_206095 (112340-112525) | |
| 245-416, gnl|panTro1|chr2 (4973029-4973217) | |
| 245-416, gnl|rheMac2|chr2 (56190889-56190706) | |
| 245-416, gnl|rn3|chr4 (144265680-144265859) | |
| 245-416, gnl|tetNig1|chr11 (9479622-9479453) | |
| 245-416, gnl|xenTro1|scaffold_173 (1806111-1806301) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |