Non-Coding RNA Search

rmed12c_n4.y1

Sequence:


               
               CGGGCCCCCAGCTGCCCCCACAGGTGCTGCACCTGCTGAGCGCAGCACCAGCTCTCAGCA
GTATTACCCTGAGAACTTCTGGGTTTTAAAATAAATCATTGGGGGTTGTTAAAAAATTAT
CTCTGCCCGGCTGGTCCCAGGGCACAGACTTCAAAATGACTTGATAAGAGAAGCCGCTCG
TGGCGTGTTCGCGGCCTCGGCGCCGTTGCAGAGCTTTATCACGTCACAGCCGCAAGAGAC
AAGGTGAGGTCATGTCAGTGTCGGAAATGGCCCGTAACGAGGTGAATGCGGCGGTGGGGG
GGGGGGGGGGAAATCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCCCCCAGCTGCCCCCACAGGTGCTGCACCTGCTGAGCGCAGCACCAGCTCTCAGCA
GTATTACCCTGAGAACTTCTGGGTTTTAAAATAAATCATTGGGGGTTGTTAAAAAATTAT
CTCTGCCCGGCTGGTCCCAGGGCACAGACTTCAAAATGACTTGATAAGAGAAGCCGCTCG
TGGCGTGTTCGCGGCCTCGGCGCCGTTGCAGAGCTTTATCACGTCACAGCCGCAAGAGAC
AAGGTGAGGTCATGTCAGTGTCGGAAATGGCCCGTAACGAGGTGAATGCGGCGGTGGGGG
GGGGGGGGGGAAATCTCC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               51-290, gnl|bosTau2|chr29 (42381554-42381312)
               

               
               51-290, gnl|canFam2|chr18 (50929567-50929245)
               

               
               51-290, gnl|dasNov1|scaffold_76026 (8802-9192)
               

               
               51-290, gnl|hg17|chr11 (70002889-70003279)
               

               
               51-290, gnl|Hg17|chr11 (70003125-70002888)
               

               
               51-290, gnl|loxAfr1|scaffold_21385 (5991-6385)
               

               
               51-290, gnl|mm7|chr7 (140841649-140841332)
               

               
               51-290, gnl|panTro1|chr9 (71131881-71132271)
               

               
               51-290, gnl|rheMac2|chr14 (4296090-4295703)
               

               
               51-290, gnl|rn3|chr1 (205000982-205000645)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-290, gnl|bosTau2|chr29 (42381554-42381312)
               

               
               51-290, gnl|canFam2|chr18 (50929567-50929245)
               

               
               51-290, gnl|dasNov1|scaffold_76026 (8802-9192)
               

               
               51-290, gnl|hg17|chr11 (70002889-70003279)
               

               
               51-290, gnl|Hg17|chr11 (70003125-70002888)
               

               
               51-290, gnl|loxAfr1|scaffold_21385 (5991-6385)
               

               
               51-290, gnl|mm7|chr7 (140841649-140841332)
               

               
               51-290, gnl|panTro1|chr9 (71131881-71132271)
               

               
               51-290, gnl|rheMac2|chr14 (4296090-4295703)
               

               
               51-290, gnl|rn3|chr1 (205000982-205000645)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	51-290, gnl\|bosTau2\|chr29 (42381554-42381312)
	51-290, gnl\|canFam2\|chr18 (50929567-50929245)
	51-290, gnl\|dasNov1\|scaffold_76026 (8802-9192)
	51-290, gnl\|hg17\|chr11 (70002889-70003279)
	51-290, gnl\|Hg17\|chr11 (70003125-70002888)
	51-290, gnl\|loxAfr1\|scaffold_21385 (5991-6385)
	51-290, gnl\|mm7\|chr7 (140841649-140841332)
	51-290, gnl\|panTro1\|chr9 (71131881-71132271)
	51-290, gnl\|rheMac2\|chr14 (4296090-4295703)
	51-290, gnl\|rn3\|chr1 (205000982-205000645)