Non-Coding RNA Search

rmed13c_g20.y1

Sequence:


               
               CCAGCAGCAATGGCTCCATCCTCCCCAGCGGCCTGTCGGCCTCCAAGTCCAACCTGGTCA
TCTCAGACCCCATCCCGGGGGCCAAGCCCCTGCCAGTGCCCCCCGAGCTGGCCCCGTTTG
TGGGGCGGCTGTCTGCCCAGGACAGTGCGCCCGTCCTGAACGGTGCGTCGGGCCCGGACA
GCGAGGACTACAGCCCCTGGGCCGAGCGCAAGGCCGCCCAGCCCAAGTCCGCGTCTCCTC
CGCAGTCGCAGAGCAAGCTGAGCGACTCCTACTCCAACACGCTTCCCGTGCGCAAGAGCG
TGGCCCCCAAGAACAGCTACGCCGCCACCGAGAACAAGACCCTGCCCCGCTCGAGCTCCA
TGGCGGCCGGCCTGGAGCGCAACGGCCGCATGCGGGTGAAGGCCATCTTCTCGCACGCGG
CCGGGGACAACAGCACGCTGCTGAGCTTCAAGGAGGGCGACCTCATCACCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGCAGCAATGGCTCCATCCTCCCCAGCGGCCTGTCGGCCTCCAAGTCCAACCTGGTCA
TCTCAGACCCCATCCCGGGGGCCAAGCCCCTGCCAGTGCCCCCCGAGCTGGCCCCGTTTG
TGGGGCGGCTGTCTGCCCAGGACAGTGCGCCCGTCCTGAACGGTGCGTCGGGCCCGGACA
GCGAGGACTACAGCCCCTGGGCCGAGCGCAAGGCCGCCCAGCCCAAGTCCGCGTCTCCTC
CGCAGTCGCAGAGCAAGCTGAGCGACTCCTACTCCAACACGCTTCCCGTGCGCAAGAGCG
TGGCCCCCAAGAACAGCTACGCCGCCACCGAGAACAAGACCCTGCCCCGCTCGAGCTCCA
TGGCGGCCGGCCTGGAGCGCAACGGCCGCATGCGGGTGAAGGCCATCTTCTCGCACGCGG
CCGGGGACAACAGCACGCTGCTGAGCTTCAAGGAGGGCGACCTCATCACCCTGC

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               125-327, gnl|bosTau2|chr19 (44828384-44828586)
               

               
               125-327, gnl|canFam2|chr9 (3922510-3922272)
               

               
               125-327, gnl|danRer3|chr3 (4630332-4630100)
               

               
               125-327, gnl|echTel1|scaffold_158797 (1561-1339)
               

               
               125-327, gnl|fr1|chrUn (170091936-170092174)
               

               
               125-327, gnl|galGal2|chr3_random (242087-241845)
               

               
               125-327, gnl|hg17|chr17 (76692289-76692528)
               

               
               125-327, gnl|Hg17|chr17 (76692301-76692503)
               

               
               125-327, gnl|mm7|chr11 (120105923-120106165)
               

               
               125-327, gnl|Mm7|chr11 (120105933-120106135)
               

               
               125-327, gnl|monDom2|scaffold_18 (12830158-12830403)
               

               
               125-327, gnl|panTro1|chr19 (80408497-80408736)
               

               
               125-327, gnl|rheMac2|chr16 (76552384-76552603)
               

               
               125-327, gnl|rn3|chr10 (109423781-109424023)
               

               
               125-327, gnl|tetNig1|chr3 (10533221-10532988)
               

               
               125-327, gnl|xenTro1|scaffold_413 (203161-202949)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               125-327, gnl|bosTau2|chr19 (44828384-44828586)
               

               
               125-327, gnl|canFam2|chr9 (3922510-3922272)
               

               
               125-327, gnl|danRer3|chr3 (4630332-4630100)
               

               
               125-327, gnl|echTel1|scaffold_158797 (1561-1339)
               

               
               125-327, gnl|fr1|chrUn (170091936-170092174)
               

               
               125-327, gnl|galGal2|chr3_random (242087-241845)
               

               
               125-327, gnl|hg17|chr17 (76692289-76692528)
               

               
               125-327, gnl|Hg17|chr17 (76692301-76692503)
               

               
               125-327, gnl|mm7|chr11 (120105923-120106165)
               

               
               125-327, gnl|Mm7|chr11 (120105933-120106135)
               

               
               125-327, gnl|monDom2|scaffold_18 (12830158-12830403)
               

               
               125-327, gnl|panTro1|chr19 (80408497-80408736)
               

               
               125-327, gnl|rheMac2|chr16 (76552384-76552603)
               

               
               125-327, gnl|rn3|chr10 (109423781-109424023)
               

               
               125-327, gnl|tetNig1|chr3 (10533221-10532988)
               

               
               125-327, gnl|xenTro1|scaffold_413 (203161-202949)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	125-327, gnl\|bosTau2\|chr19 (44828384-44828586)
	125-327, gnl\|canFam2\|chr9 (3922510-3922272)
	125-327, gnl\|danRer3\|chr3 (4630332-4630100)
	125-327, gnl\|echTel1\|scaffold_158797 (1561-1339)
	125-327, gnl\|fr1\|chrUn (170091936-170092174)
	125-327, gnl\|galGal2\|chr3_random (242087-241845)
	125-327, gnl\|hg17\|chr17 (76692289-76692528)
	125-327, gnl\|Hg17\|chr17 (76692301-76692503)
	125-327, gnl\|mm7\|chr11 (120105923-120106165)
	125-327, gnl\|Mm7\|chr11 (120105933-120106135)
	125-327, gnl\|monDom2\|scaffold_18 (12830158-12830403)
	125-327, gnl\|panTro1\|chr19 (80408497-80408736)
	125-327, gnl\|rheMac2\|chr16 (76552384-76552603)
	125-327, gnl\|rn3\|chr10 (109423781-109424023)
	125-327, gnl\|tetNig1\|chr3 (10533221-10532988)
	125-327, gnl\|xenTro1\|scaffold_413 (203161-202949)