Non-Coding RNA Search

rmed14c_e24.y1

Sequence:


               
               AATGGACCATATTCTGATTTGCTGTGTTTGTCTTGGAGATAATAGCGAGGATGCTGATGA
AATAATTCAGTGCGACAATTGTGGCATTACAGTCCATGAAGGTTGCTATGGAGTTGACGG
AGAGAGCGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGGACCATATTCTGATTTGCTGTGTTTGTCTTGGAGATAATAGCGAGGATGCTGATGA
AATAATTCAGTGCGACAATTGTGGCATTACAGTCCATGAAGGTTGCTATGGAGTTGACGG
AGAGAGCGACT

Aligned organism(s): 17 entry(ies)

More info

Aligned organism(s): 17 entry(ies)

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               1-103, gnl|bosTau2|chr4 (5069984-5070086)
               

               
               1-103, gnl|canFam2|chr14 (28873658-28873808)
               

               
               1-103, gnl|danRer3|chr19 (53032272-53032125)
               

               
               1-103, gnl|dasNov1|scaffold_23718 (19309-19459)
               

               
               1-103, gnl|echTel1|scaffold_309629 (40663-40513)
               

               
               1-103, gnl|fr1|chrUn (247341823-247341961)
               

               
               1-103, gnl|galGal2|chr2 (25347734-25347884)
               

               
               1-103, gnl|hg17|chr7 (10803569-10803719)
               

               
               1-103, gnl|Hg17|chr7 (10803614-10803716)
               

               
               1-103, gnl|loxAfr1|scaffold_5718 (94605-94755)
               

               
               1-103, gnl|mm7|chr6 (11878898-11879048)
               

               
               1-103, gnl|Mm7|chr6 (11878943-11879045)
               

               
               1-103, gnl|panTro1|chr6 (11441250-11441400)
               

               
               1-103, gnl|rheMac2|chr3 (115319680-115319530)
               

               
               1-103, gnl|rn3|chr4 (37282273-37282423)
               

               
               1-103, gnl|tetNig1|chr17 (610422-610307)
               

               
               1-103, gnl|xenTro1|scaffold_1019 (170613-170463)

Aligned organism(s): 17 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-103, gnl|bosTau2|chr4 (5069984-5070086)
               

               
               1-103, gnl|canFam2|chr14 (28873658-28873808)
               

               
               1-103, gnl|danRer3|chr19 (53032272-53032125)
               

               
               1-103, gnl|dasNov1|scaffold_23718 (19309-19459)
               

               
               1-103, gnl|echTel1|scaffold_309629 (40663-40513)
               

               
               1-103, gnl|fr1|chrUn (247341823-247341961)
               

               
               1-103, gnl|galGal2|chr2 (25347734-25347884)
               

               
               1-103, gnl|hg17|chr7 (10803569-10803719)
               

               
               1-103, gnl|Hg17|chr7 (10803614-10803716)
               

               
               1-103, gnl|loxAfr1|scaffold_5718 (94605-94755)
               

               
               1-103, gnl|mm7|chr6 (11878898-11879048)
               

               
               1-103, gnl|Mm7|chr6 (11878943-11879045)
               

               
               1-103, gnl|panTro1|chr6 (11441250-11441400)
               

               
               1-103, gnl|rheMac2|chr3 (115319680-115319530)
               

               
               1-103, gnl|rn3|chr4 (37282273-37282423)
               

               
               1-103, gnl|tetNig1|chr17 (610422-610307)
               

               
               1-103, gnl|xenTro1|scaffold_1019 (170613-170463)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	1-103, gnl\|bosTau2\|chr4 (5069984-5070086)
	1-103, gnl\|canFam2\|chr14 (28873658-28873808)
	1-103, gnl\|danRer3\|chr19 (53032272-53032125)
	1-103, gnl\|dasNov1\|scaffold_23718 (19309-19459)
	1-103, gnl\|echTel1\|scaffold_309629 (40663-40513)
	1-103, gnl\|fr1\|chrUn (247341823-247341961)
	1-103, gnl\|galGal2\|chr2 (25347734-25347884)
	1-103, gnl\|hg17\|chr7 (10803569-10803719)
	1-103, gnl\|Hg17\|chr7 (10803614-10803716)
	1-103, gnl\|loxAfr1\|scaffold_5718 (94605-94755)
	1-103, gnl\|mm7\|chr6 (11878898-11879048)
	1-103, gnl\|Mm7\|chr6 (11878943-11879045)
	1-103, gnl\|panTro1\|chr6 (11441250-11441400)
	1-103, gnl\|rheMac2\|chr3 (115319680-115319530)
	1-103, gnl\|rn3\|chr4 (37282273-37282423)
	1-103, gnl\|tetNig1\|chr17 (610422-610307)
	1-103, gnl\|xenTro1\|scaffold_1019 (170613-170463)