Non-Coding RNA Search

rmed14c_i2.y1

Sequence:


               
               TGCCGGCCGTCCCCTCCAAGGCACCAGACTTGGATACTCCAGCCAGATGAGCCCTAGATG
GCTGCAGTTCCTGCCTATGTCACATGCAGCTGAGGGACTGCCCAGCTGACCCGTGGTCAC
CCTTCAACCCACAGAACCATGAGAGATAATAAATGGTTTCTCATTTTAACCACATAAACC
ATGAAGTTTTGGGGGTAGAATTTCCTGTTGTGGCTCAGaagaacctgacatagtatccat
gaggatttgggttctatccctggcctcgctcattgggttaagaatccagcattgcggcaa
gctatggcatagatcacagatgtggctcagatcctgtgttgctgtggctgtggtctaggc
cagcactgcagctccaattcgacccctagcctgggaacttccatgtgctgcaggtgcagc
cttaaagagacaagaaaaaGTTTGGGGGGTGGTTTGTTATGCAACTATTCATTAATCAAA
ACAGTCACTCCTGGTACCCTAGCAgttaaggattcagcattgtcactgctgtggctcact
gccactgctgtggctcaggtttgatccctggccCAGGTGACTTCTGCATAAGGAGGGCAC
AGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCGGCCGTCCCCTCCAAGGCACCAGACTTGGATACTCCAGCCAGATGAGCCCTAGATG
GCTGCAGTTCCTGCCTATGTCACATGCAGCTGAGGGACTGCCCAGCTGACCCGTGGTCAC
CCTTCAACCCACAGAACCATGAGAGATAATAAATGGTTTCTCATTTTAACCACATAAACC
ATGAAGTTTTGGGGGTAGAATTTCCTGTTGTGGCTCAGaagaacctgacatagtatccat
gaggatttgggttctatccctggcctcgctcattgggttaagaatccagcattgcggcaa
gctatggcatagatcacagatgtggctcagatcctgtgttgctgtggctgtggtctaggc
cagcactgcagctccaattcgacccctagcctgggaacttccatgtgctgcaggtgcagc
cttaaagagacaagaaaaaGTTTGGGGGGTGGTTTGTTATGCAACTATTCATTAATCAAA
ACAGTCACTCCTGGTACCCTAGCAgttaaggattcagcattgtcactgctgtggctcact
gccactgctgtggctcaggtttgatccctggccCAGGTGACTTCTGCATAAGGAGGGCAC
AGC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               9-151, gnl|bosTau2|chr19 (41485944-41486087)
               

               
               9-151, gnl|canFam2|chr9 (13315965-13316159)
               

               
               9-151, gnl|echTel1|scaffold_241967 (6062-6249)
               

               
               9-151, gnl|hg17|chr17 (42394966-42395187)
               

               
               9-151, gnl|Hg17|chr17 (42395047-42395172)
               

               
               9-151, gnl|loxAfr1|scaffold_9584 (36982-37215)
               

               
               9-151, gnl|mm7|chr11 (103766839-103766650)
               

               
               9-151, gnl|oryCun1|scaffold_9290 (3241-3023)
               

               
               9-151, gnl|panTro1|chr19 (62729029-62728808)
               

               
               9-151, gnl|rheMac2|chr16 (55869226-55869021)
               

               
               9-151, gnl|rn3|chr10 (92827947-92827750)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-151, gnl|bosTau2|chr19 (41485944-41486087)
               

               
               9-151, gnl|canFam2|chr9 (13315965-13316159)
               

               
               9-151, gnl|echTel1|scaffold_241967 (6062-6249)
               

               
               9-151, gnl|hg17|chr17 (42394966-42395187)
               

               
               9-151, gnl|Hg17|chr17 (42395047-42395172)
               

               
               9-151, gnl|loxAfr1|scaffold_9584 (36982-37215)
               

               
               9-151, gnl|mm7|chr11 (103766839-103766650)
               

               
               9-151, gnl|oryCun1|scaffold_9290 (3241-3023)
               

               
               9-151, gnl|panTro1|chr19 (62729029-62728808)
               

               
               9-151, gnl|rheMac2|chr16 (55869226-55869021)
               

               
               9-151, gnl|rn3|chr10 (92827947-92827750)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	9-151, gnl\|bosTau2\|chr19 (41485944-41486087)
	9-151, gnl\|canFam2\|chr9 (13315965-13316159)
	9-151, gnl\|echTel1\|scaffold_241967 (6062-6249)
	9-151, gnl\|hg17\|chr17 (42394966-42395187)
	9-151, gnl\|Hg17\|chr17 (42395047-42395172)
	9-151, gnl\|loxAfr1\|scaffold_9584 (36982-37215)
	9-151, gnl\|mm7\|chr11 (103766839-103766650)
	9-151, gnl\|oryCun1\|scaffold_9290 (3241-3023)
	9-151, gnl\|panTro1\|chr19 (62729029-62728808)
	9-151, gnl\|rheMac2\|chr16 (55869226-55869021)
	9-151, gnl\|rn3\|chr10 (92827947-92827750)