Non-Coding RNA Search

rmed16c_h11.y1

Sequence:


               
               ATGAGCTGGACCCTCTTGCCCTGAATTTCTCGGGGCAGGAACTCGGCGGCGCCGCCGCGC
CGCCTGCCGCCCACCGCGCCCCCGGGATGGGGGTGAACGCGGTGCACTGGTTCCGAAAGG
GGCTCCGGCTTCACGACAACCCCGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCATCC
GCTGCGTCTACATCCTCGACCCCTGGTTCGCCGGCTCTTCCAATGTGGGCATCAACAGGT
GGAGATTTTTGCTTCAGTGTCTTGAAGACCTTGATGCCAATTTGCGAAAATTAAACTCTC
GTCTGTTTGTGATTCGTGGACAACCAGCAGATGTGTTTCCCAGGCTTTTCAAGGAATGGA
ACATTACTAAACTTTCAATTGAGTATGATTCTGAGCCCTTTGGAAAGGAAAGAGATGCAG
CTATTAAAAAACTGGCTACTGAAGCTGGAGTAGAAGTAATTGTACGAATTTCACATACAT
TATATGACCTAGACAAGATCATAGAACTAAATGGTGGACAGCCACCTCTTACTTATAAAA
GATTCCAGACTCTCATCAGCAAAATGGAACCACTAGAGATACCAGTAGAGACAATTACTT
CGGAAGTGATAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAGCTGGACCCTCTTGCCCTGAATTTCTCGGGGCAGGAACTCGGCGGCGCCGCCGCGC
CGCCTGCCGCCCACCGCGCCCCCGGGATGGGGGTGAACGCGGTGCACTGGTTCCGAAAGG
GGCTCCGGCTTCACGACAACCCCGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCATCC
GCTGCGTCTACATCCTCGACCCCTGGTTCGCCGGCTCTTCCAATGTGGGCATCAACAGGT
GGAGATTTTTGCTTCAGTGTCTTGAAGACCTTGATGCCAATTTGCGAAAATTAAACTCTC
GTCTGTTTGTGATTCGTGGACAACCAGCAGATGTGTTTCCCAGGCTTTTCAAGGAATGGA
ACATTACTAAACTTTCAATTGAGTATGATTCTGAGCCCTTTGGAAAGGAAAGAGATGCAG
CTATTAAAAAACTGGCTACTGAAGCTGGAGTAGAAGTAATTGTACGAATTTCACATACAT
TATATGACCTAGACAAGATCATAGAACTAAATGGTGGACAGCCACCTCTTACTTATAAAA
GATTCCAGACTCTCATCAGCAAAATGGAACCACTAGAGATACCAGTAGAGACAATTACTT
CGGAAGTGATAGAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15824991|gb|AAL09563.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15824991|gb|AAL09563.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               44-244, gnl|bosTau2|chr15 (47670562-47670760)
               

               
               44-244, gnl|Hg17|chr11 (45825634-45825832)
               

               
               44-244, gnl|Mm7|chr2 (92284732-92284528)
               


               
               352-497, gnl|bosTau2|chr5 (40832010-40832155)
               

               
               352-497, gnl|Hg17|chr12 (105901495-105901350)
               

               
               352-497, gnl|Mm7|chr10 (84692721-84692576)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-244, gnl|bosTau2|chr15 (47670562-47670760)
               

               
               44-244, gnl|Hg17|chr11 (45825634-45825832)
               

               
               44-244, gnl|Mm7|chr2 (92284732-92284528)
               


               
               352-497, gnl|bosTau2|chr5 (40832010-40832155)
               

               
               352-497, gnl|Hg17|chr12 (105901495-105901350)
               

               
               352-497, gnl|Mm7|chr10 (84692721-84692576)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	44-244, gnl\|bosTau2\|chr15 (47670562-47670760)
	44-244, gnl\|Hg17\|chr11 (45825634-45825832)
	44-244, gnl\|Mm7\|chr2 (92284732-92284528)

	352-497, gnl\|bosTau2\|chr5 (40832010-40832155)
	352-497, gnl\|Hg17\|chr12 (105901495-105901350)
	352-497, gnl\|Mm7\|chr10 (84692721-84692576)