Non-Coding RNA Search

rmed16c_p14.y1

Sequence:


               
               GTTGATCTGGGGCTCTGGAACCAAGCTAATTATAAAGCCAGGTAAGTCTCACAGATGTGA
CTGTAAGGGAGAGGAGACATGGGTGGAATAATATACGAAGCATAGCGTGCAAATTATATT
TTTAAGAACCACCCAGCCTGCTGGAGACAATGCACTCGACTCAAATGGGGTTTTCACTCC
TAGTGAGAAGCAATGTCAGCCACCAACTCTCTTGTTTGATCTAGTTGCTTCCAGAATGAA
TAATGCTTAACTAGCCCTCCAAGAAAGCAGAGCTGGGTTGTTAAGGAGTATCTAATTCCC
TCTGATATGGTTGGAATTCTTCCCCCAAGAATTTACCCAGCCTCATTCCATTAAAAGAGA
AAACTCAGAGAAAATGGAAAGGGCTCCAGTCAAAGGCCCGGGGGTGAggagttcccatcg
tggctcagtgggttaagaacccaacacagtatccctaaggatgcaggttcaatccctggc
ctcactcagtgtgttaaggatccagcgttgccacaagctgtgg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGATCTGGGGCTCTGGAACCAAGCTAATTATAAAGCCAGGTAAGTCTCACAGATGTGA
CTGTAAGGGAGAGGAGACATGGGTGGAATAATATACGAAGCATAGCGTGCAAATTATATT
TTTAAGAACCACCCAGCCTGCTGGAGACAATGCACTCGACTCAAATGGGGTTTTCACTCC
TAGTGAGAAGCAATGTCAGCCACCAACTCTCTTGTTTGATCTAGTTGCTTCCAGAATGAA
TAATGCTTAACTAGCCCTCCAAGAAAGCAGAGCTGGGTTGTTAAGGAGTATCTAATTCCC
TCTGATATGGTTGGAATTCTTCCCCCAAGAATTTACCCAGCCTCATTCCATTAAAAGAGA
AAACTCAGAGAAAATGGAAAGGGCTCCAGTCAAAGGCCCGGGGGTGAggagttcccatcg
tggctcagtgggttaagaacccaacacagtatccctaaggatgcaggttcaatccctggc
ctcactcagtgtgttaaggatccagcgttgccacaagctgtgg

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-407, gnl|bosTau2|chr10 (14505439-14505039)
               

               
               1-407, gnl|Hg17|chr14 (22047443-22047859)
               

               
               1-407, gnl|Mm7|chr14 (49055255-49055703)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-407, gnl|bosTau2|chr10 (14505439-14505039)
               

               
               1-407, gnl|Hg17|chr14 (22047443-22047859)
               

               
               1-407, gnl|Mm7|chr14 (49055255-49055703)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	1-407, gnl\|bosTau2\|chr10 (14505439-14505039)
	1-407, gnl\|Hg17\|chr14 (22047443-22047859)
	1-407, gnl\|Mm7\|chr14 (49055255-49055703)