rmed27c_j18.y1
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GCTTTCTGGAGCATACAACCGGCAGGACCTTTGAGAGTGAAGTGAGATACCGGTGTAACC
CTGGGTATAAGTCAGTGGGAAGTCCTGTATTTGTCTGCCAAGCCAATCGCCACGGGCACA
GTGAATCCCCTCTGTCCTGCATCCCTCTCAACTGTGGAAAGCCTCCCCCGATCCAGAAGG
GTTACATGAAAGGAGAAAATTTTGAAGTAGGGTCCAAGGTTCAGTTTTTCTGTAATGAGG
GTTATGAGCTTATGGGTGATCATTCTGGGACATGCCTGAAATCTGGCAAATGGAGTAAGA
AGCCGAACCAAAAGTGCATGCCCACCAAGTGCCCAGAGCCCCCTCTCTTGGAAAACCAGC
TTGTACTGAAGGAGCTGACCACAGATGTGGGAGTGGTGACATTTTCCTGTAAAGAAGGGC
ATGCCCTCCAGGGCCCGTCTGTCCTGAAATGCTTGCCATCCCAGCAGTGGAATGATTCCT
TTCCTGTCTGTAAGATGGTTCTTGGCCTCCCACCTCCCCTGATTTCTTTGGGTGTCCCTG
CTCCTTCTTCTGCTCTTCATTTGGGAAGTA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCTTTCTGGAGCATACAACCGGCAGGACCTTTGAGAGTGAAGTGAGATACCGGTGTAACC
CTGGGTATAAGTCAGTGGGAAGTCCTGTATTTGTCTGCCAAGCCAATCGCCACGGGCACA
GTGAATCCCCTCTGTCCTGCATCCCTCTCAACTGTGGAAAGCCTCCCCCGATCCAGAAGG
GTTACATGAAAGGAGAAAATTTTGAAGTAGGGTCCAAGGTTCAGTTTTTCTGTAATGAGG
GTTATGAGCTTATGGGTGATCATTCTGGGACATGCCTGAAATCTGGCAAATGGAGTAAGA
AGCCGAACCAAAAGTGCATGCCCACCAAGTGCCCAGAGCCCCCTCTCTTGGAAAACCAGC
TTGTACTGAAGGAGCTGACCACAGATGTGGGAGTGGTGACATTTTCCTGTAAAGAAGGGC
ATGCCCTCCAGGGCCCGTCTGTCCTGAAATGCTTGCCATCCCAGCAGTGGAATGATTCCT
TTCCTGTCTGTAAGATGGTTCTTGGCCTCCCACCTCCCCTGATTTCTTTGGGTGTCCCTG
CTCCTTCTTCTGCTCTTCATTTGGGAAGTA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
239-323, + strand, RNAmicro p=0.981027 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
239-323, + strand, RNAmicro p=0.981027 |
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10-570, gnl|bosTau2|chr8 (53910367-53910927) |
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10-570, gnl|canFam2|chr11 (68376625-68377321) |
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10-570, gnl|danRer3|chr7 (11356000-11356693) |
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10-570, gnl|dasNov1|scaffold_52521 (890-1586) |
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10-570, gnl|echTel1|scaffold_227885 (716-1412) |
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10-570, gnl|fr1|chrUn (165974252-165974951) |
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10-570, gnl|galGal2|chrZ (32586623-32587316) |
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10-570, gnl|hg17|chr9 (110250006-110250702) |
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10-570, gnl|Hg17|chr9 (110250788-110250228) |
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10-570, gnl|loxAfr1|scaffold_120034 (1417-718) |
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10-570, gnl|mm7|chr4 (58111748-58112444) |
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10-570, gnl|Mm7|chr4 (58112530-58111970) |
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10-570, gnl|monDom2|scaffold_17 (25708373-25709069) |
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10-570, gnl|oryCun1|scaffold_198773 (89011-88322) |
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10-570, gnl|panTro1|chr11 (94776724-94777420) |
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10-570, gnl|rheMac2|chr15 (25789280-25788584) |
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10-570, gnl|rn3|chr5 (76054740-76055436) |
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10-570, gnl|tetNig1|chrUn_random (21483383-21482684) |
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10-570, gnl|xenTro1|scaffold_153 (2009782-2009086) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-570, gnl|bosTau2|chr8 (53910367-53910927) |
|
10-570, gnl|canFam2|chr11 (68376625-68377321) |
|
10-570, gnl|danRer3|chr7 (11356000-11356693) |
|
10-570, gnl|dasNov1|scaffold_52521 (890-1586) |
|
10-570, gnl|echTel1|scaffold_227885 (716-1412) |
|
10-570, gnl|fr1|chrUn (165974252-165974951) |
|
10-570, gnl|galGal2|chrZ (32586623-32587316) |
|
10-570, gnl|hg17|chr9 (110250006-110250702) |
|
10-570, gnl|Hg17|chr9 (110250788-110250228) |
|
10-570, gnl|loxAfr1|scaffold_120034 (1417-718) |
|
10-570, gnl|mm7|chr4 (58111748-58112444) |
|
10-570, gnl|Mm7|chr4 (58112530-58111970) |
|
10-570, gnl|monDom2|scaffold_17 (25708373-25709069) |
|
10-570, gnl|oryCun1|scaffold_198773 (89011-88322) |
|
10-570, gnl|panTro1|chr11 (94776724-94777420) |
|
10-570, gnl|rheMac2|chr15 (25789280-25788584) |
|
10-570, gnl|rn3|chr5 (76054740-76055436) |
|
10-570, gnl|tetNig1|chrUn_random (21483383-21482684) |
|
10-570, gnl|xenTro1|scaffold_153 (2009782-2009086) |
