Non-Coding RNA Search

rmed32c_g19.y1

Sequence:


               
               CTTCTATCTTCTGACTTCAGTTTCGCCCTCCAGAATCATAATAGATGATAAGCCCATTCC
CATCCTGGTTTGGAGATGGTTCTCTCGTCCTCCCAGGCCTTCTTGTTTTAGTCCAAACAC
CCCCAGTTCTTTTCATCAGTCCTCACTTGCTATATTTCCACTCCCCTGATCTCATGGTCA
TTTATGGACAAGCTTGAGGTTGGAAAGGAATTGGGCTCTTGCAAAAGTCCTTCCAGGCTT
GAGCTCTGTGAGTGGTCTGCTCTGGGCAGGATGGGCAAGAGTGTTTATCACCTTCTGCAT
GGGCATCAGACCTGCCGTTGGGGTGGCTTTGGATCAGGGGAGCTTTCTTGGAACTTCCCT
GCAAGTCACACCGAGGAATCCTTTGAGGGCTGTCTTCTCAAACCCTCGCCCTGAGTCTCC
CTGTGGATTCTGCACCTCGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTATCTTCTGACTTCAGTTTCGCCCTCCAGAATCATAATAGATGATAAGCCCATTCC
CATCCTGGTTTGGAGATGGTTCTCTCGTCCTCCCAGGCCTTCTTGTTTTAGTCCAAACAC
CCCCAGTTCTTTTCATCAGTCCTCACTTGCTATATTTCCACTCCCCTGATCTCATGGTCA
TTTATGGACAAGCTTGAGGTTGGAAAGGAATTGGGCTCTTGCAAAAGTCCTTCCAGGCTT
GAGCTCTGTGAGTGGTCTGCTCTGGGCAGGATGGGCAAGAGTGTTTATCACCTTCTGCAT
GGGCATCAGACCTGCCGTTGGGGTGGCTTTGGATCAGGGGAGCTTTCTTGGAACTTCCCT
GCAAGTCACACCGAGGAATCCTTTGAGGGCTGTCTTCTCAAACCCTCGCCCTGAGTCTCC
CTGTGGATTCTGCACCTCGTGT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               3-441, gnl|bosTau2|chr3 (81447762-81448191)
               

               
               3-441, gnl|canFam2|chr25 (48905152-48905719)
               

               
               3-441, gnl|dasNov1|scaffold_34492 (5565-6132)
               

               
               3-441, gnl|echTel1|scaffold_271391 (16279-15672)
               

               
               3-441, gnl|hg17|chr2 (235405328-235405943)
               

               
               3-441, gnl|Hg17|chr2 (235406212-235405580)
               

               
               3-441, gnl|loxAfr1|scaffold_74573 (5105-4487)
               

               
               3-441, gnl|mm7|chr1 (88780944-88781543)
               

               
               3-441, gnl|oryCun1|scaffold_178064 (3791-3236)
               

               
               3-441, gnl|panTro1|chr13 (126121311-126121926)
               

               
               3-441, gnl|rheMac2|chr12 (98591515-98592132)
               

               
               3-441, gnl|rn3|chr9 (87981373-87981879)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-441, gnl|bosTau2|chr3 (81447762-81448191)
               

               
               3-441, gnl|canFam2|chr25 (48905152-48905719)
               

               
               3-441, gnl|dasNov1|scaffold_34492 (5565-6132)
               

               
               3-441, gnl|echTel1|scaffold_271391 (16279-15672)
               

               
               3-441, gnl|hg17|chr2 (235405328-235405943)
               

               
               3-441, gnl|Hg17|chr2 (235406212-235405580)
               

               
               3-441, gnl|loxAfr1|scaffold_74573 (5105-4487)
               

               
               3-441, gnl|mm7|chr1 (88780944-88781543)
               

               
               3-441, gnl|oryCun1|scaffold_178064 (3791-3236)
               

               
               3-441, gnl|panTro1|chr13 (126121311-126121926)
               

               
               3-441, gnl|rheMac2|chr12 (98591515-98592132)
               

               
               3-441, gnl|rn3|chr9 (87981373-87981879)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	3-441, gnl\|bosTau2\|chr3 (81447762-81448191)
	3-441, gnl\|canFam2\|chr25 (48905152-48905719)
	3-441, gnl\|dasNov1\|scaffold_34492 (5565-6132)
	3-441, gnl\|echTel1\|scaffold_271391 (16279-15672)
	3-441, gnl\|hg17\|chr2 (235405328-235405943)
	3-441, gnl\|Hg17\|chr2 (235406212-235405580)
	3-441, gnl\|loxAfr1\|scaffold_74573 (5105-4487)
	3-441, gnl\|mm7\|chr1 (88780944-88781543)
	3-441, gnl\|oryCun1\|scaffold_178064 (3791-3236)
	3-441, gnl\|panTro1\|chr13 (126121311-126121926)
	3-441, gnl\|rheMac2\|chr12 (98591515-98592132)
	3-441, gnl\|rn3\|chr9 (87981373-87981879)