Non-Coding RNA Search

rmed34c_i24.y1

Sequence:


               
               GGAAGGCGAGGCTGGTTGATGGTCTCCAGCTGGAATGGATTGGGAACTGGAAAAGTCAGA
AGTCAGGGACAAGAAGAGGCTAACATGACTGGTACCAGTATAATTTAGTGAATCACCCCA
TTTCTAAAGAGGAGCCCAGAGGAAGACTGGTCATCTCTTGCAGATCTCAAAACCATGGCT
CAGTTGGCTCAGGAATCAGTGTCATTCAAAGATGTGACTGTGGACTTTACTCAGGAGGAG
TGGCAGCACCTGGATCCTGCTCAGAAGACGCTGTACATGGATGTGATGTTGGAAAACTAT
TGCCACCTTGTTTCTGTGGGGTGTCACATGACCAAGCCTGACGTGATCCTCAAATTGGAA
CGAGGAGAAGAGCCATGGACATCATTTACAGGCCATACCTGCTTAGAAGAAAACTGGAAA
GCCGAAGACTTTTTAGTGAAATTCAAAGAACAACAAAATAAGTACCCTAGATCAGTTTTA
TTAATCAACCACAAAAAACTGATTAAGGATAACAATAATGCATTCGAAAAGACATTTACT
TTAAGCAAAAACCCTACTAATTCAAAAAATCTACCTCCTGAATATGGCACTCATGGAAAG
ATTTTTAACAATATTTCAGAATTAATCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGCGAGGCTGGTTGATGGTCTCCAGCTGGAATGGATTGGGAACTGGAAAAGTCAGA
AGTCAGGGACAAGAAGAGGCTAACATGACTGGTACCAGTATAATTTAGTGAATCACCCCA
TTTCTAAAGAGGAGCCCAGAGGAAGACTGGTCATCTCTTGCAGATCTCAAAACCATGGCT
CAGTTGGCTCAGGAATCAGTGTCATTCAAAGATGTGACTGTGGACTTTACTCAGGAGGAG
TGGCAGCACCTGGATCCTGCTCAGAAGACGCTGTACATGGATGTGATGTTGGAAAACTAT
TGCCACCTTGTTTCTGTGGGGTGTCACATGACCAAGCCTGACGTGATCCTCAAATTGGAA
CGAGGAGAAGAGCCATGGACATCATTTACAGGCCATACCTGCTTAGAAGAAAACTGGAAA
GCCGAAGACTTTTTAGTGAAATTCAAAGAACAACAAAATAAGTACCCTAGATCAGTTTTA
TTAATCAACCACAAAAAACTGATTAAGGATAACAATAATGCATTCGAAAAGACATTTACT
TTAAGCAAAAACCCTACTAATTCAAAAAATCTACCTCCTGAATATGGCACTCATGGAAAG
ATTTTTAACAATATTTCAGAATTAATCAT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               191-378, gnl|bosTau2|chr6 (33795577-33795390)
               

               
               191-378, gnl|Hg17|chr10 (38212545-38213007)
               

               
               191-378, gnl|Mm7|chr14 (52327275-52327460)
               


               
               404-629, gnl|bosTau2|chr18 (43167145-43167370)
               

               
               404-629, gnl|Hg17|chr19 (41808869-41809091)
               

               
               404-629, gnl|Mm7|chr7 (27076294-27076498)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               191-378, gnl|bosTau2|chr6 (33795577-33795390)
               

               
               191-378, gnl|Hg17|chr10 (38212545-38213007)
               

               
               191-378, gnl|Mm7|chr14 (52327275-52327460)
               


               
               404-629, gnl|bosTau2|chr18 (43167145-43167370)
               

               
               404-629, gnl|Hg17|chr19 (41808869-41809091)
               

               
               404-629, gnl|Mm7|chr7 (27076294-27076498)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	191-378, gnl\|bosTau2\|chr6 (33795577-33795390)
	191-378, gnl\|Hg17\|chr10 (38212545-38213007)
	191-378, gnl\|Mm7\|chr14 (52327275-52327460)

	404-629, gnl\|bosTau2\|chr18 (43167145-43167370)
	404-629, gnl\|Hg17\|chr19 (41808869-41809091)
	404-629, gnl\|Mm7\|chr7 (27076294-27076498)