Non-Coding RNA Search

rmga18_e13.y1

Sequence:


               
               AAAAAACTTGTTCATAAAAGACACTTTGCCCATTTCCCCAATCTTCTAGGTTTAAAGACT
TTCTCAATAGACAGTTACCAGGTATCCACAGAAATTTTTTGCCATCACCACAATAAAAAG
GTGACTAGATACCTTCCTACCAGAGCCTCCTGTTTGGACAATGAGCTCAGTATTTATTGA
ATGAATCAATAGTATGTACAGTGCAAATAATTACCATGATATGATTTATGTTTATCAAGA
GAATGTATTTGTGTATGTGTGTGTATATTATCAATGTAATCAGTAGGCTACTTGTAAAGT
TAAAATAATTCCTATCAAAAAGATTTGAAATAAAACCCCTAATTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAACTTGTTCATAAAAGACACTTTGCCCATTTCCCCAATCTTCTAGGTTTAAAGACT
TTCTCAATAGACAGTTACCAGGTATCCACAGAAATTTTTTGCCATCACCACAATAAAAAG
GTGACTAGATACCTTCCTACCAGAGCCTCCTGTTTGGACAATGAGCTCAGTATTTATTGA
ATGAATCAATAGTATGTACAGTGCAAATAATTACCATGATATGATTTATGTTTATCAAGA
GAATGTATTTGTGTATGTGTGTGTATATTATCAATGTAATCAGTAGGCTACTTGTAAAGT
TAAAATAATTCCTATCAAAAAGATTTGAAATAAAACCCCTAATTTCTG

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               5-306, gnl|bosTau2|chr2 (44502874-44503165)
               

               
               5-306, gnl|canFam2|chr19 (33716086-33715868)
               

               
               5-306, gnl|dasNov1|scaffold_114599 (1859-1648)
               

               
               5-306, gnl|hg17|chr2 (119788949-119789091)
               

               
               5-306, gnl|loxAfr1|scaffold_4254 (13713-13455)
               

               
               5-306, gnl|panTro1|chr13 (5813247-5813391)
               

               
               5-306, gnl|rheMac2|chr13 (125489074-125489227)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-306, gnl|bosTau2|chr2 (44502874-44503165)
               

               
               5-306, gnl|canFam2|chr19 (33716086-33715868)
               

               
               5-306, gnl|dasNov1|scaffold_114599 (1859-1648)
               

               
               5-306, gnl|hg17|chr2 (119788949-119789091)
               

               
               5-306, gnl|loxAfr1|scaffold_4254 (13713-13455)
               

               
               5-306, gnl|panTro1|chr13 (5813247-5813391)
               

               
               5-306, gnl|rheMac2|chr13 (125489074-125489227)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               mga (0.160205)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)

	5-306, gnl\|bosTau2\|chr2 (44502874-44503165)
	5-306, gnl\|canFam2\|chr19 (33716086-33715868)
	5-306, gnl\|dasNov1\|scaffold_114599 (1859-1648)
	5-306, gnl\|hg17\|chr2 (119788949-119789091)
	5-306, gnl\|loxAfr1\|scaffold_4254 (13713-13455)
	5-306, gnl\|panTro1\|chr13 (5813247-5813391)
	5-306, gnl\|rheMac2\|chr13 (125489074-125489227)