Non-Coding RNA Search

rmga36_p20.y1

Sequence:


               
               ATTACAATGAGTTTTTGAAAAATAAATATGGTTCAATAATGTAAATGGTAATTGCTGTAT
TATTATAATGGAAATAAAATTAACAGGATTTAATGGACTGAGCGACCATTAATTTTCACT
TAACTTATGGGAGATTTTTGAATGCCACTCGATGCACTATATAGCCAGGTTTCTGCATGA
GCTCCTTTATGAAAGAAATTGGACTCAGCAGCGCTTGCTTAGAACTTGAAGTCCAATTTT
CTTCCATTACCTCGTCCCCCACCTTCTTTATCCACCCCTCTCCAGCCTTCTATAAGTGCA
ATTAAGTTCTCTAAAGTGGAATGCCGCTTTTTCAATCAACAAGGCTCATGAATAGCCCTA
ATTAACTTTTGTCCTTGTCTCCTTTGATGTATTGACCTATTAAAAAAAAAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACAATGAGTTTTTGAAAAATAAATATGGTTCAATAATGTAAATGGTAATTGCTGTAT
TATTATAATGGAAATAAAATTAACAGGATTTAATGGACTGAGCGACCATTAATTTTCACT
TAACTTATGGGAGATTTTTGAATGCCACTCGATGCACTATATAGCCAGGTTTCTGCATGA
GCTCCTTTATGAAAGAAATTGGACTCAGCAGCGCTTGCTTAGAACTTGAAGTCCAATTTT
CTTCCATTACCTCGTCCCCCACCTTCTTTATCCACCCCTCTCCAGCCTTCTATAAGTGCA
ATTAAGTTCTCTAAAGTGGAATGCCGCTTTTTCAATCAACAAGGCTCATGAATAGCCCTA
ATTAACTTTTGTCCTTGTCTCCTTTGATGTATTGACCTATTAAAAAAAAAAAAAG

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

Help | Less info


               
               1-232, gnl|bosTau2|chr10 (6436459-6436221)
               

               
               1-232, gnl|canFam2|chr30 (34245425-34245758)
               

               
               1-232, gnl|dasNov1|scaffold_835 (45917-46247)
               

               
               1-232, gnl|galGal2|chr10 (19477820-19478166)
               

               
               1-232, gnl|hg17|chr15 (65151400-65151723)
               

               
               1-232, gnl|Hg17|chr15 (65151520-65151722)
               

               
               1-232, gnl|loxAfr1|scaffold_276 (181562-181995)
               

               
               1-232, gnl|mm7|chr9 (63780593-63780258)
               

               
               1-232, gnl|Mm7|chr9 (63780464-63780242)
               

               
               1-232, gnl|monDom2|scaffold_12 (45336857-45336523)
               

               
               1-232, gnl|oryCun1|scaffold_176660 (3323-3658)
               

               
               1-232, gnl|panTro1|chr16 (65661061-65661386)
               

               
               1-232, gnl|rheMac2|chr7 (45642566-45642894)
               

               
               1-232, gnl|rn3|chr8 (67965133-67964801)
               

               
               1-232, gnl|xenTro1|scaffold_862 (510318-510642)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-232, gnl|bosTau2|chr10 (6436459-6436221)
               

               
               1-232, gnl|canFam2|chr30 (34245425-34245758)
               

               
               1-232, gnl|dasNov1|scaffold_835 (45917-46247)
               

               
               1-232, gnl|galGal2|chr10 (19477820-19478166)
               

               
               1-232, gnl|hg17|chr15 (65151400-65151723)
               

               
               1-232, gnl|Hg17|chr15 (65151520-65151722)
               

               
               1-232, gnl|loxAfr1|scaffold_276 (181562-181995)
               

               
               1-232, gnl|mm7|chr9 (63780593-63780258)
               

               
               1-232, gnl|Mm7|chr9 (63780464-63780242)
               

               
               1-232, gnl|monDom2|scaffold_12 (45336857-45336523)
               

               
               1-232, gnl|oryCun1|scaffold_176660 (3323-3658)
               

               
               1-232, gnl|panTro1|chr16 (65661061-65661386)
               

               
               1-232, gnl|rheMac2|chr7 (45642566-45642894)
               

               
               1-232, gnl|rn3|chr8 (67965133-67964801)
               

               
               1-232, gnl|xenTro1|scaffold_862 (510318-510642)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mga (0.160205)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)

	1-232, gnl\|bosTau2\|chr10 (6436459-6436221)
	1-232, gnl\|canFam2\|chr30 (34245425-34245758)
	1-232, gnl\|dasNov1\|scaffold_835 (45917-46247)
	1-232, gnl\|galGal2\|chr10 (19477820-19478166)
	1-232, gnl\|hg17\|chr15 (65151400-65151723)
	1-232, gnl\|Hg17\|chr15 (65151520-65151722)
	1-232, gnl\|loxAfr1\|scaffold_276 (181562-181995)
	1-232, gnl\|mm7\|chr9 (63780593-63780258)
	1-232, gnl\|Mm7\|chr9 (63780464-63780242)
	1-232, gnl\|monDom2\|scaffold_12 (45336857-45336523)
	1-232, gnl\|oryCun1\|scaffold_176660 (3323-3658)
	1-232, gnl\|panTro1\|chr16 (65661061-65661386)
	1-232, gnl\|rheMac2\|chr7 (45642566-45642894)
	1-232, gnl\|rn3\|chr8 (67965133-67964801)
	1-232, gnl\|xenTro1\|scaffold_862 (510318-510642)