Non-Coding RNA Search

rmgm024_e7.y1

Sequence:


               
               GGTGAAATGATGAAGAGTTCTTTCCTAATTGTGCCTATCCTGGCATTAACACTGCCTTTT
TTGGGTGCAGAGGAGCAAAACCAGGAAAAACTAATGCGCTGTGAGAGTGATAAAAGATTG
TTCAATGAAGAAAAAGTCAAATATATCCCAATTTATTACATGCTGAATAGGTTTCCTAGT
TATGGATTTTTCTACCAACATAGATCAGCTGTATCACCTAATAACCAATTTATACCTTAC
CCATATTATGCAAGGCCAGTTGTAGCTGGGCCACATGCTCAAAAACCTCAATGGCAAGAC
CAGCCAAATGTCTACCCACCTACAGTGGCACGTCGCCCACGCCCACATGCATCATTTATT
GCCATTCCCCCAAAGAAAAATCAGGATAAAACGGCCATCCCTGCTATCAATTCCATTGCT
ACTGTTGAGCCTACAATTGTACCTGCCACTGAACCAATAGTGAACGCTGAACCAATAGTG
AACGCTGTAGTAACTCCAGAAGCTTCCTCAGAATTCCTCATCACAAGCGCACCTGAGACC
ACCACTGTCCAAGTCACTTCACCCGTGGTCTAAAAACTCTAAGGAGACATCGAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGAAATGATGAAGAGTTCTTTCCTAATTGTGCCTATCCTGGCATTAACACTGCCTTTT
TTGGGTGCAGAGGAGCAAAACCAGGAAAAACTAATGCGCTGTGAGAGTGATAAAAGATTG
TTCAATGAAGAAAAAGTCAAATATATCCCAATTTATTACATGCTGAATAGGTTTCCTAGT
TATGGATTTTTCTACCAACATAGATCAGCTGTATCACCTAATAACCAATTTATACCTTAC
CCATATTATGCAAGGCCAGTTGTAGCTGGGCCACATGCTCAAAAACCTCAATGGCAAGAC
CAGCCAAATGTCTACCCACCTACAGTGGCACGTCGCCCACGCCCACATGCATCATTTATT
GCCATTCCCCCAAAGAAAAATCAGGATAAAACGGCCATCCCTGCTATCAATTCCATTGCT
ACTGTTGAGCCTACAATTGTACCTGCCACTGAACCAATAGTGAACGCTGAACCAATAGTG
AACGCTGTAGTAACTCCAGAAGCTTCCTCAGAATTCCTCATCACAAGCGCACCTGAGACC
ACCACTGTCCAAGTCACTTCACCCGTGGTCTAAAAACTCTAAGGAGACATCGAAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               CASK_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               CASK_PIG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               96-309, gnl|bosTau2|chr6 (45941278-45941062)
               

               
               96-309, gnl|Hg17|chr4 (71295474-71295678)
               

               
               96-309, gnl|Mm7|chr5 (87866487-87866698)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-309, gnl|bosTau2|chr6 (45941278-45941062)
               

               
               96-309, gnl|Hg17|chr4 (71295474-71295678)
               

               
               96-309, gnl|Mm7|chr5 (87866487-87866698)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mgm (0.180343)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.180343)

	96-309, gnl\|bosTau2\|chr6 (45941278-45941062)
	96-309, gnl\|Hg17\|chr4 (71295474-71295678)
	96-309, gnl\|Mm7\|chr5 (87866487-87866698)