Non-Coding RNA Search

rmgp017_p18.y1

Sequence:


               
               TGAAACTGACTGTGTCTTCTTCTTAAACACAAGTTTCACCAATAGAACCTATGATACCTA
TGTGTGCTGCAGAGAGCTCTTTCAAAGTACTCTTCTGAATGGCACCAACCCTCCTTCTTT
TTCTGGTCCCTGGGAAGATAAAGAGTTCAGTGCTATAGCCCTTGCTAACTGCTGTGAATT
CTACACCAATGCTGTCTGTGCCTAAAACTGGTCCATTAACATAACAGTCCTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAACTGACTGTGTCTTCTTCTTAAACACAAGTTTCACCAATAGAACCTATGATACCTA
TGTGTGCTGCAGAGAGCTCTTTCAAAGTACTCTTCTGAATGGCACCAACCCTCCTTCTTT
TTCTGGTCCCTGGGAAGATAAAGAGTTCAGTGCTATAGCCCTTGCTAACTGCTGTGAATT
CTACACCAATGCTGTCTGTGCCTAAAACTGGTCCATTAACATAACAGTCCTGAT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               86-234, gnl|bosTau2|chr10 (44863255-44863104)
               

               
               86-234, gnl|canFam2|chr30 (14653512-14653658)
               

               
               86-234, gnl|dasNov1|scaffold_8241 (30151-30302)
               

               
               86-234, gnl|echTel1|scaffold_293803 (5800-5951)
               

               
               86-234, gnl|galGal2|chr10 (1772200-1772059)
               

               
               86-234, gnl|hg17|chr15 (43354849-43355000)
               

               
               86-234, gnl|Hg17|chr15 (43354884-43355036)
               

               
               86-234, gnl|loxAfr1|scaffold_6778 (6044-5893)
               

               
               86-234, gnl|mm7|chr2 (122268152-122268299)
               

               
               86-234, gnl|Mm7|chr2 (122268183-122268333)
               

               
               86-234, gnl|monDom2|scaffold_53 (8668071-8667946)
               

               
               86-234, gnl|panTro1|chr16 (43301670-43301821)
               

               
               86-234, gnl|rheMac2|chr7 (23630690-23630842)
               

               
               86-234, gnl|rn3|chr3 (109256885-109256740)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-234, gnl|bosTau2|chr10 (44863255-44863104)
               

               
               86-234, gnl|canFam2|chr30 (14653512-14653658)
               

               
               86-234, gnl|dasNov1|scaffold_8241 (30151-30302)
               

               
               86-234, gnl|echTel1|scaffold_293803 (5800-5951)
               

               
               86-234, gnl|galGal2|chr10 (1772200-1772059)
               

               
               86-234, gnl|hg17|chr15 (43354849-43355000)
               

               
               86-234, gnl|Hg17|chr15 (43354884-43355036)
               

               
               86-234, gnl|loxAfr1|scaffold_6778 (6044-5893)
               

               
               86-234, gnl|mm7|chr2 (122268152-122268299)
               

               
               86-234, gnl|Mm7|chr2 (122268183-122268333)
               

               
               86-234, gnl|monDom2|scaffold_53 (8668071-8667946)
               

               
               86-234, gnl|panTro1|chr16 (43301670-43301821)
               

               
               86-234, gnl|rheMac2|chr7 (23630690-23630842)
               

               
               86-234, gnl|rn3|chr3 (109256885-109256740)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mgp (0.230681)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)

	86-234, gnl\|bosTau2\|chr10 (44863255-44863104)
	86-234, gnl\|canFam2\|chr30 (14653512-14653658)
	86-234, gnl\|dasNov1\|scaffold_8241 (30151-30302)
	86-234, gnl\|echTel1\|scaffold_293803 (5800-5951)
	86-234, gnl\|galGal2\|chr10 (1772200-1772059)
	86-234, gnl\|hg17\|chr15 (43354849-43355000)
	86-234, gnl\|Hg17\|chr15 (43354884-43355036)
	86-234, gnl\|loxAfr1\|scaffold_6778 (6044-5893)
	86-234, gnl\|mm7\|chr2 (122268152-122268299)
	86-234, gnl\|Mm7\|chr2 (122268183-122268333)
	86-234, gnl\|monDom2\|scaffold_53 (8668071-8667946)
	86-234, gnl\|panTro1\|chr16 (43301670-43301821)
	86-234, gnl\|rheMac2\|chr7 (23630690-23630842)
	86-234, gnl\|rn3\|chr3 (109256885-109256740)