Non-Coding RNA Search

rmgp027_g16.y1

Sequence:


               
               AGGTGAACCTTTCCTGTTTAATTTCTTATATAGAGACCTATTCACTACAATGATTATTGG
TTGTGCATTATGCGTGACTCTTCCAATGAGTTTATTAAACTTTTTCAGAAGCTATAAAAA
TAACACCTTGAAACACAATTCAGTCTATGAAGCTATGGTTCCCTTCTTTTCTCCATGTTT
GCTCTTCGTTTTGTCTACAGCGTGGATCCTCCAGTCACCTTCAGATATTTTAGAGTTACA
TCCTAGAGTTTTCTACTTTATGGTTGGAACAGCCTTTGCCAACATCACATGCCAGCTGAT
TGTTTGTCAAATGAGCAGTACCCGGTGTCCAACTTTGAATTGGTTGCTGGCTCCCCTCTT
CTTGGTTGTCATGGTGGTAAATGTAGGAGTAACCTCTTACGTTGAGAGCATTTTCCTGTT
TACATTAACCACTGCTTTCACTCTGGCCCACATCCATTATGGAGTACGAGTGGTAAAGCA
GCTGAGCAGCCATTTTCAGATTTACCCCTTCTCATTGAGGAAACCAAACTCGGATTGACT
AGGAATGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTGAACCTTTCCTGTTTAATTTCTTATATAGAGACCTATTCACTACAATGATTATTGG
TTGTGCATTATGCGTGACTCTTCCAATGAGTTTATTAAACTTTTTCAGAAGCTATAAAAA
TAACACCTTGAAACACAATTCAGTCTATGAAGCTATGGTTCCCTTCTTTTCTCCATGTTT
GCTCTTCGTTTTGTCTACAGCGTGGATCCTCCAGTCACCTTCAGATATTTTAGAGTTACA
TCCTAGAGTTTTCTACTTTATGGTTGGAACAGCCTTTGCCAACATCACATGCCAGCTGAT
TGTTTGTCAAATGAGCAGTACCCGGTGTCCAACTTTGAATTGGTTGCTGGCTCCCCTCTT
CTTGGTTGTCATGGTGGTAAATGTAGGAGTAACCTCTTACGTTGAGAGCATTTTCCTGTT
TACATTAACCACTGCTTTCACTCTGGCCCACATCCATTATGGAGTACGAGTGGTAAAGCA
GCTGAGCAGCCATTTTCAGATTTACCCCTTCTCATTGAGGAAACCAAACTCGGATTGACT
AGGAATGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12855451|dbj|BAB30340.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12855451|dbj|BAB30340.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               86-312, gnl|bosTau2|chr11 (54845421-54845646)
               

               
               86-312, gnl|Hg17|chr2 (26519456-26519682)
               

               
               86-312, gnl|Mm7|chr5 (29296937-29297151)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-312, gnl|bosTau2|chr11 (54845421-54845646)
               

               
               86-312, gnl|Hg17|chr2 (26519456-26519682)
               

               
               86-312, gnl|Mm7|chr5 (29296937-29297151)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mgp (0.230681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)

	86-312, gnl\|bosTau2\|chr11 (54845421-54845646)
	86-312, gnl\|Hg17\|chr2 (26519456-26519682)
	86-312, gnl\|Mm7\|chr5 (29296937-29297151)