Non-Coding RNA Search

rnbm02b_i17.y1

Sequence:


               
               AGCACCTGGACCTACAATTAATTTTAAGAAATTGAAAGTGATCTATACAAATGTCTAATA
TGGAAATATGCTACGTATTTGTTGCATAGTGTTCAGTGAAAAATATCCTGAACTGTGTTG
AAATCACGTGGTCAGTTTCGGTCAAGTGTGTTAAGTTTAGTAATCTAGAGTATACACTAC
CACCGTTACAAAAATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCACCTGGACCTACAATTAATTTTAAGAAATTGAAAGTGATCTATACAAATGTCTAATA
TGGAAATATGCTACGTATTTGTTGCATAGTGTTCAGTGAAAAATATCCTGAACTGTGTTG
AAATCACGTGGTCAGTTTCGGTCAAGTGTGTTAAGTTTAGTAATCTAGAGTATACACTAC
CACCGTTACAAAAATTAT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-149, gnl|bosTau2|chr14 (4399763-4399914)
               

               
               1-149, gnl|canFam2|chr13 (32321251-32322088)
               

               
               1-149, gnl|dasNov1|scaffold_13782 (1005-170)
               

               
               1-149, gnl|echTel1|scaffold_185886 (1091-228)
               

               
               1-149, gnl|hg17|chr8 (133880832-133881667)
               

               
               1-149, gnl|Hg17|chr8 (133881000-133881151)
               

               
               1-149, gnl|loxAfr1|scaffold_22783 (57319-58151)
               

               
               1-149, gnl|mm7|chr15 (66681517-66682242)
               

               
               1-149, gnl|Mm7|chr15 (66681676-66681827)
               

               
               1-149, gnl|monDom2|scaffold_3 (17597136-17596203)
               

               
               1-149, gnl|oryCun1|scaffold_176403 (30049-29201)
               

               
               1-149, gnl|panTro1|chr7 (136823763-136824595)
               

               
               1-149, gnl|rheMac2|chr8 (135360235-135361068)
               

               
               1-149, gnl|rn3|chr7 (103999296-104000013)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-149, gnl|bosTau2|chr14 (4399763-4399914)
               

               
               1-149, gnl|canFam2|chr13 (32321251-32322088)
               

               
               1-149, gnl|dasNov1|scaffold_13782 (1005-170)
               

               
               1-149, gnl|echTel1|scaffold_185886 (1091-228)
               

               
               1-149, gnl|hg17|chr8 (133880832-133881667)
               

               
               1-149, gnl|Hg17|chr8 (133881000-133881151)
               

               
               1-149, gnl|loxAfr1|scaffold_22783 (57319-58151)
               

               
               1-149, gnl|mm7|chr15 (66681517-66682242)
               

               
               1-149, gnl|Mm7|chr15 (66681676-66681827)
               

               
               1-149, gnl|monDom2|scaffold_3 (17597136-17596203)
               

               
               1-149, gnl|oryCun1|scaffold_176403 (30049-29201)
               

               
               1-149, gnl|panTro1|chr7 (136823763-136824595)
               

               
               1-149, gnl|rheMac2|chr8 (135360235-135361068)
               

               
               1-149, gnl|rn3|chr7 (103999296-104000013)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	1-149, gnl\|bosTau2\|chr14 (4399763-4399914)
	1-149, gnl\|canFam2\|chr13 (32321251-32322088)
	1-149, gnl\|dasNov1\|scaffold_13782 (1005-170)
	1-149, gnl\|echTel1\|scaffold_185886 (1091-228)
	1-149, gnl\|hg17\|chr8 (133880832-133881667)
	1-149, gnl\|Hg17\|chr8 (133881000-133881151)
	1-149, gnl\|loxAfr1\|scaffold_22783 (57319-58151)
	1-149, gnl\|mm7\|chr15 (66681517-66682242)
	1-149, gnl\|Mm7\|chr15 (66681676-66681827)
	1-149, gnl\|monDom2\|scaffold_3 (17597136-17596203)
	1-149, gnl\|oryCun1\|scaffold_176403 (30049-29201)
	1-149, gnl\|panTro1\|chr7 (136823763-136824595)
	1-149, gnl\|rheMac2\|chr8 (135360235-135361068)
	1-149, gnl\|rn3\|chr7 (103999296-104000013)