Non-Coding RNA Search

rnbm02b_p20.y1

Sequence:


               
               TCCCCGGGCTGCAGGTctcactaaaaaaccctgaatcacccgtatcataaattactcaat
ccccaagcccattaaacttaaaaataatttctacttcctcttccttcaatgcataataaa
ccatacaaaactccattattaaaccagaaacaaatgctccaaaaacagtcttattagaaa
ctcaaacctcagggtacatctcagtagccatggcagtagtataaCCAAAAACCACTAACA
TACCCCCCAAATAAATCAAAAACACCATTAAACCTAAAAAAgacccaccaaaattcaata
caataccacaaccaactccaccacttacaatcaacccaagtccaccataaataggagagg
gtttagaagaaaaaccaacaaacccaataacaaaaatagtacttaaaataaatgcaatat
atattgtcattattctcacatggaatctaaccacgaccaatgacatgaaaaatcatcgtt
gtacttcaactacaagaaccttAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCCGGGCTGCAGGTctcactaaaaaaccctgaatcacccgtatcataaattactcaat
ccccaagcccattaaacttaaaaataatttctacttcctcttccttcaatgcataataaa
ccatacaaaactccattattaaaccagaaacaaatgctccaaaaacagtcttattagaaa
ctcaaacctcagggtacatctcagtagccatggcagtagtataaCCAAAAACCACTAACA
TACCCCCCAAATAAATCAAAAACACCATTAAACCTAAAAAAgacccaccaaaattcaata
caataccacaaccaactccaccacttacaatcaacccaagtccaccataaataggagagg
gtttagaagaaaaaccaacaaacccaataacaaaaatagtacttaaaataaatgcaatat
atattgtcattattctcacatggaatctaaccacgaccaatgacatgaaaaatcatcgtt
gtacttcaactacaagaaccttAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|5835874|ref|NP_008645.1|ND6_15069

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|5835874|ref|NP_008645.1|ND6_15069

ncRNA annotation: 2 entry(ies)

Help | Less info


               
               499-431, RF00005;tRNA; (AF486863.1/14093-14025), blast E-value=3e-32
               

               
               499-431, , RaveNnA Score=44.51

ncRNA annotation: 2 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               499-431, RF00005;tRNA; (AF486863.1/14093-14025), blast E-value=3e-32
               

               
               499-431, , RaveNnA Score=44.51

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	499-431, RF00005;tRNA; (AF486863.1/14093-14025), blast E-value=3e-32
	499-431, , RaveNnA Score=44.51