Non-Coding RNA Search

rnbm10b_p2.y1

Sequence:


               
               AGAATGAAAAAAAAAAAAAAGAAACTCATGTCAAATCGAAAGCAGATTTGTTAGGAGCTT
TACAACTGCCTGCTCAGACATCAGTAGTTCATTTTGCTGACAGAGCTGCAAAAGCCGCTG
TTAAAACATGGCAGAGACCCACCTTCAATACAACAAGAAATGTTTGTTCATTTTTAAACC
ATGCTTTGCACAAGAAAAATGGATAAAATGATTCTAAAAGGGGCTAAAAGAagttccctg
gtggcctagtgggttaaagatccattgttgtcactgctgtggctcaggtcactgctgtgg
cacaggtttaagccctggcctgggaacttctacatggtatgggcgcagctaaaaataaaa
TACTTTCAAGAGTTCAAAAAAATAAATAAATGGGGGCTAAAAGAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATGAAAAAAAAAAAAAAGAAACTCATGTCAAATCGAAAGCAGATTTGTTAGGAGCTT
TACAACTGCCTGCTCAGACATCAGTAGTTCATTTTGCTGACAGAGCTGCAAAAGCCGCTG
TTAAAACATGGCAGAGACCCACCTTCAATACAACAAGAAATGTTTGTTCATTTTTAAACC
ATGCTTTGCACAAGAAAAATGGATAAAATGATTCTAAAAGGGGCTAAAAGAagttccctg
gtggcctagtgggttaaagatccattgttgtcactgctgtggctcaggtcactgctgtgg
cacaggtttaagccctggcctgggaacttctacatggtatgggcgcagctaaaaataaaa
TACTTTCAAGAGTTCAAAAAAATAAATAAATGGGGGCTAAAAGAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               17-161, - strand, RNAz p=0.974244

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               17-161, - strand, RNAz p=0.974244

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               17-187, gnl|bosTau2|chr16 (43538956-43538786)
               

               
               17-187, gnl|Hg17|chr1 (172606978-172606793)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-187, gnl|bosTau2|chr16 (43538956-43538786)
               

               
               17-187, gnl|Hg17|chr1 (172606978-172606793)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	17-187, gnl\|bosTau2\|chr16 (43538956-43538786)
	17-187, gnl\|Hg17\|chr1 (172606978-172606793)