Non-Coding RNA Search

rnbm24b_e1.y1

Sequence:


               
               GAGGTACAAACTTTATTTTGTTTCTTTATAAAGGCACGGTGGCCTCTTGGGTTTTTTCCC
CCCACTTTCTTAACAAAATATAATAGCTTCTCCTTGAACACAAAGACCTCAAAATTGTAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTACAAACTTTATTTTGTTTCTTTATAAAGGCACGGTGGCCTCTTGGGTTTTTTCCC
CCCACTTTCTTAACAAAATATAATAGCTTCTCCTTGAACACAAAGACCTCAAAATTGTAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 17 entry(ies)

More info

Aligned organism(s): 17 entry(ies)

Help | Less info


               
               4-153, gnl|bosTau2|chr25 (4231272-4231424)
               

               
               4-153, gnl|canFam2|chr6 (40152891-40152776)
               

               
               4-153, gnl|danRer3|chrUn (89314694-89314603)
               

               
               4-153, gnl|dasNov1|scaffold_12085 (475-361)
               

               
               4-153, gnl|echTel1|scaffold_280892 (3578-3460)
               

               
               4-153, gnl|fr1|chrUn (108331716-108331629)
               

               
               4-153, gnl|hg17|chr16 (4247187-4247302)
               

               
               4-153, gnl|Hg17|chr16 (4247199-4247388)
               

               
               4-153, gnl|loxAfr1|scaffold_18436 (23293-23180)
               

               
               4-153, gnl|mm7|chr16 (4216431-4216552)
               

               
               4-153, gnl|Mm7|chr16 (4216443-4216634)
               

               
               4-153, gnl|monDom2|scaffold_49 (4591813-4591702)
               

               
               4-153, gnl|panTro1|chr18 (4119382-4119497)
               

               
               4-153, gnl|rheMac2|chr20 (3331722-3331837)
               

               
               4-153, gnl|rn3|chr10 (11159765-11159644)
               

               
               4-153, gnl|tetNig1|chr3 (9763160-9763245)
               

               
               4-153, gnl|xenTro1|scaffold_12 (2528680-2528548)

Aligned organism(s): 17 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-153, gnl|bosTau2|chr25 (4231272-4231424)
               

               
               4-153, gnl|canFam2|chr6 (40152891-40152776)
               

               
               4-153, gnl|danRer3|chrUn (89314694-89314603)
               

               
               4-153, gnl|dasNov1|scaffold_12085 (475-361)
               

               
               4-153, gnl|echTel1|scaffold_280892 (3578-3460)
               

               
               4-153, gnl|fr1|chrUn (108331716-108331629)
               

               
               4-153, gnl|hg17|chr16 (4247187-4247302)
               

               
               4-153, gnl|Hg17|chr16 (4247199-4247388)
               

               
               4-153, gnl|loxAfr1|scaffold_18436 (23293-23180)
               

               
               4-153, gnl|mm7|chr16 (4216431-4216552)
               

               
               4-153, gnl|Mm7|chr16 (4216443-4216634)
               

               
               4-153, gnl|monDom2|scaffold_49 (4591813-4591702)
               

               
               4-153, gnl|panTro1|chr18 (4119382-4119497)
               

               
               4-153, gnl|rheMac2|chr20 (3331722-3331837)
               

               
               4-153, gnl|rn3|chr10 (11159765-11159644)
               

               
               4-153, gnl|tetNig1|chr3 (9763160-9763245)
               

               
               4-153, gnl|xenTro1|scaffold_12 (2528680-2528548)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	4-153, gnl\|bosTau2\|chr25 (4231272-4231424)
	4-153, gnl\|canFam2\|chr6 (40152891-40152776)
	4-153, gnl\|danRer3\|chrUn (89314694-89314603)
	4-153, gnl\|dasNov1\|scaffold_12085 (475-361)
	4-153, gnl\|echTel1\|scaffold_280892 (3578-3460)
	4-153, gnl\|fr1\|chrUn (108331716-108331629)
	4-153, gnl\|hg17\|chr16 (4247187-4247302)
	4-153, gnl\|Hg17\|chr16 (4247199-4247388)
	4-153, gnl\|loxAfr1\|scaffold_18436 (23293-23180)
	4-153, gnl\|mm7\|chr16 (4216431-4216552)
	4-153, gnl\|Mm7\|chr16 (4216443-4216634)
	4-153, gnl\|monDom2\|scaffold_49 (4591813-4591702)
	4-153, gnl\|panTro1\|chr18 (4119382-4119497)
	4-153, gnl\|rheMac2\|chr20 (3331722-3331837)
	4-153, gnl\|rn3\|chr10 (11159765-11159644)
	4-153, gnl\|tetNig1\|chr3 (9763160-9763245)
	4-153, gnl\|xenTro1\|scaffold_12 (2528680-2528548)