rnbm36b_k18.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACAAACAGACAACATGGTGCATCTGTCTGCTGAAGAGAAGGAGGCCGTCCTCGGCCTGT GGGGCAAAGTGAATGTGGACGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCT ACCCCTGGACTCAGAGGTTCTTCGAGTCCTTTGGGGACCTGTCCAATGCCGATGCCGTCA TGGGCAATCCCAAGGTGAAGGCCCACGGCAAGAAGGTGCTCCAGTCCTTCAGTGACGGCC TGAAACATCTCGACAACCTCAAGGGCACCTTTGCTAAGCTGAGCGAGCTGCACTGTGACC AGCTGCACGTGGATCCTGAGAACTTCAGGCTCCTGGGCAACGTGATAGTGGTTGTTCTGG CTCGCCGCCTTGGCCATGACTTCAACCCGGATGTGCAGGCTGCTTTTCAGAAGGTGGTGG CTGGTGTGGCCAATGCCCTGGCCCACAAGTACCACTAAGTTCCCCTTCCTGATTTCCAGG AGGAGCCCTTTTTCCTCTGAACCCAAAAACTGGATATGGAAATATTATGAAGAGTTTTGA GCATCTGGCCTCTGCGTAATAAAAACATTTATTTTCATTGCAAAAAAAAAAAAAAAAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACAAACAGACAACATGGTGCATCTGTCTGCTGAAGAGAAGGAGGCCGTCCTCGGCCTGT GGGGCAAAGTGAATGTGGACGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCT ACCCCTGGACTCAGAGGTTCTTCGAGTCCTTTGGGGACCTGTCCAATGCCGATGCCGTCA TGGGCAATCCCAAGGTGAAGGCCCACGGCAAGAAGGTGCTCCAGTCCTTCAGTGACGGCC TGAAACATCTCGACAACCTCAAGGGCACCTTTGCTAAGCTGAGCGAGCTGCACTGTGACC AGCTGCACGTGGATCCTGAGAACTTCAGGCTCCTGGGCAACGTGATAGTGGTTGTTCTGG CTCGCCGCCTTGGCCATGACTTCAACCCGGATGTGCAGGCTGCTTTTCAGAAGGTGGTGG CTGGTGTGGCCAATGCCCTGGCCCACAAGTACCACTAAGTTCCCCTTCCTGATTTCCAGG AGGAGCCCTTTTTCCTCTGAACCCAAAAACTGGATATGGAAATATTATGAAGAGTTTTGA GCATCTGGCCTCTGCGTAATAAAAACATTTATTTTCATTGCAAAAAAAAAAAAAAAAAAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 408-519, - strand, RNAz p=0.836906 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 408-519, - strand, RNAz p=0.836906 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 105-327, gnl|bosTau2|chr15 (31547969-31548191) | |
| 105-327, gnl|canFam2|chr21 (31297816-31297969) | |
| 105-327, gnl|danRer3|chr14 (52027702-52027855) | |
| 105-327, gnl|dasNov1|scaffold_13030 (34989-34836) | |
| 105-327, gnl|echTel1|scaffold_291727 (50072-49919) | |
| 105-327, gnl|fr1|chrUn (269727330-269727483) | |
| 105-327, gnl|galGal2|chr1 (188136630-188136477) | |
| 105-327, gnl|hg17|chr11 (5204379-5204532) | |
| 105-327, gnl|Hg17|chr11 (5204607-5204385) | |
| 105-327, gnl|loxAfr1|scaffold_3994 (95353-95200) | |
| 105-327, gnl|mm7|chr7 (99864254-99864406) | |
| 105-327, gnl|Mm7|chr7 (99883651-99883429) | |
| 105-327, gnl|monDom2|scaffold_111 (1430434-1430587) | |
| 105-327, gnl|oryCun1|scaffold_212048 (55125-55278) | |
| 105-327, gnl|panTro1|chr9 (5283210-5283363) | |
| 105-327, gnl|rheMac2|chr14 (68175209-68175056) | |
| 105-327, gnl|rn3|chr1 (161701009-161701162) | |
| 105-327, gnl|tetNig1|chr2 (3548897-3548740) | |
| 105-327, gnl|xenTro1|scaffold_289 (335758-335605) | |
| 329-582, gnl|bosTau2|chr15 (31549093-31549347) | |
| 329-582, gnl|Mm7|chr7 (99882773-99882512) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 105-327, gnl|bosTau2|chr15 (31547969-31548191) | |
| 105-327, gnl|canFam2|chr21 (31297816-31297969) | |
| 105-327, gnl|danRer3|chr14 (52027702-52027855) | |
| 105-327, gnl|dasNov1|scaffold_13030 (34989-34836) | |
| 105-327, gnl|echTel1|scaffold_291727 (50072-49919) | |
| 105-327, gnl|fr1|chrUn (269727330-269727483) | |
| 105-327, gnl|galGal2|chr1 (188136630-188136477) | |
| 105-327, gnl|hg17|chr11 (5204379-5204532) | |
| 105-327, gnl|Hg17|chr11 (5204607-5204385) | |
| 105-327, gnl|loxAfr1|scaffold_3994 (95353-95200) | |
| 105-327, gnl|mm7|chr7 (99864254-99864406) | |
| 105-327, gnl|Mm7|chr7 (99883651-99883429) | |
| 105-327, gnl|monDom2|scaffold_111 (1430434-1430587) | |
| 105-327, gnl|oryCun1|scaffold_212048 (55125-55278) | |
| 105-327, gnl|panTro1|chr9 (5283210-5283363) | |
| 105-327, gnl|rheMac2|chr14 (68175209-68175056) | |
| 105-327, gnl|rn3|chr1 (161701009-161701162) | |
| 105-327, gnl|tetNig1|chr2 (3548897-3548740) | |
| 105-327, gnl|xenTro1|scaffold_289 (335758-335605) | |
| 329-582, gnl|bosTau2|chr15 (31549093-31549347) | |
| 329-582, gnl|Mm7|chr7 (99882773-99882512) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nbm (0.0993246) |