rnca03b_f10.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGGCGAGCAAGGAGAGGCCGGCCAGAAAGGTGACGCTGGTGCCCCAGGTCCTCAGGGG CCCTCTGGAGCTCCTGGGCCTCAGGGTCCCACTGGTGTGACTGGTCCTAAAGGAGCCCGA GGTGCTCAAGGCCCCCCGGGAGCCACCGGATTCCCCGGAGCTGCTGGCCGCGTCGGACCC CCAGGCTCCAATGGCAACCCTGGACCCCCTGGTCCCCCTGGTCCTTCTGGAAAAGATGGT CCCAAAGGCGCTCGAGGAGACAGTGGCCCCCCTGGCCGAGCTGGTGACCCTGGCCTCCAA GGTCCTGCTGGACCCCCTGGCGAGAAGGGAGAGCCTGGAGAGGATGGTCCCTCTGGTCCT GATGGTCCTCCAGGTCCCCAGGGTCTGGCTGGTCAACGGGGCATCGTCGGTCTGCCTGGA CAGCGTGGTGAGCGAGGATTCCCCGGCCTGCCTGGCCCATCGGGCGAGCCTGGCAAGCAG GGAGCTCCCGGAGCATCTGGAGACCGAGGTCCCCCTGGTCCTGTCGGTCCTCCCGGCCTG ACTGGTCCTTCTGGTGAACCTGGACGTGAGGGAAGCCCCGGTGCTGATGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGGCGAGCAAGGAGAGGCCGGCCAGAAAGGTGACGCTGGTGCCCCAGGTCCTCAGGGG CCCTCTGGAGCTCCTGGGCCTCAGGGTCCCACTGGTGTGACTGGTCCTAAAGGAGCCCGA GGTGCTCAAGGCCCCCCGGGAGCCACCGGATTCCCCGGAGCTGCTGGCCGCGTCGGACCC CCAGGCTCCAATGGCAACCCTGGACCCCCTGGTCCCCCTGGTCCTTCTGGAAAAGATGGT CCCAAAGGCGCTCGAGGAGACAGTGGCCCCCCTGGCCGAGCTGGTGACCCTGGCCTCCAA GGTCCTGCTGGACCCCCTGGCGAGAAGGGAGAGCCTGGAGAGGATGGTCCCTCTGGTCCT GATGGTCCTCCAGGTCCCCAGGGTCTGGCTGGTCAACGGGGCATCGTCGGTCTGCCTGGA CAGCGTGGTGAGCGAGGATTCCCCGGCCTGCCTGGCCCATCGGGCGAGCCTGGCAAGCAG GGAGCTCCCGGAGCATCTGGAGACCGAGGTCCCCCTGGTCCTGTCGGTCCTCCCGGCCTG ACTGGTCCTTCTGGTGAACCTGGACGTGAGGGAAGCCCCGGTGCTGATGGC |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 186-355, gnl|bosTau2|chr5 (25503759-25503590) | |
| 186-355, gnl|Hg17|chr12 (46658815-46658646) | |
| 186-355, gnl|Mm7|chr15 (97984076-97983907) | |
| 455-576, gnl|bosTau2|chr5 (25503057-25502936) | |
| 455-576, gnl|canFam2|chr27 (9794545-9794409) | |
| 455-576, gnl|danRer3|chrUn (140985597-140985725) | |
| 455-576, gnl|dasNov1|scaffold_14458 (6735-6599) | |
| 455-576, gnl|echTel1|scaffold_239717 (2980-2844) | |
| 455-576, gnl|fr1|chrUn (70096671-70096542) | |
| 455-576, gnl|galGal2|chr2 (22911602-22911463) | |
| 455-576, gnl|hg17|chr12 (46658050-46658186) | |
| 455-576, gnl|Hg17|chr12 (46658177-46658054) | |
| 455-576, gnl|loxAfr1|scaffold_12633 (48658-48522) | |
| 455-576, gnl|mm7|chr15 (97983318-97983455) | |
| 455-576, gnl|Mm7|chr15 (97983446-97983323) | |
| 455-576, gnl|monDom2|scaffold_234 (237885-238024) | |
| 455-576, gnl|oryCun1|scaffold_213621 (6027-5891) | |
| 455-576, gnl|panTro1|chr10 (47727627-47727763) | |
| 455-576, gnl|rheMac2|chr11 (45050847-45050983) | |
| 455-576, gnl|rn3|chr7 (136759652-136759788) | |
| 455-576, gnl|tetNig1|chr9 (7672377-7672261) | |
| 455-576, gnl|xenTro1|scaffold_136 (160631-160514) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 186-355, gnl|bosTau2|chr5 (25503759-25503590) | |
| 186-355, gnl|Hg17|chr12 (46658815-46658646) | |
| 186-355, gnl|Mm7|chr15 (97984076-97983907) | |
| 455-576, gnl|bosTau2|chr5 (25503057-25502936) | |
| 455-576, gnl|canFam2|chr27 (9794545-9794409) | |
| 455-576, gnl|danRer3|chrUn (140985597-140985725) | |
| 455-576, gnl|dasNov1|scaffold_14458 (6735-6599) | |
| 455-576, gnl|echTel1|scaffold_239717 (2980-2844) | |
| 455-576, gnl|fr1|chrUn (70096671-70096542) | |
| 455-576, gnl|galGal2|chr2 (22911602-22911463) | |
| 455-576, gnl|hg17|chr12 (46658050-46658186) | |
| 455-576, gnl|Hg17|chr12 (46658177-46658054) | |
| 455-576, gnl|loxAfr1|scaffold_12633 (48658-48522) | |
| 455-576, gnl|mm7|chr15 (97983318-97983455) | |
| 455-576, gnl|Mm7|chr15 (97983446-97983323) | |
| 455-576, gnl|monDom2|scaffold_234 (237885-238024) | |
| 455-576, gnl|oryCun1|scaffold_213621 (6027-5891) | |
| 455-576, gnl|panTro1|chr10 (47727627-47727763) | |
| 455-576, gnl|rheMac2|chr11 (45050847-45050983) | |
| 455-576, gnl|rn3|chr7 (136759652-136759788) | |
| 455-576, gnl|tetNig1|chr9 (7672377-7672261) | |
| 455-576, gnl|xenTro1|scaffold_136 (160631-160514) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) |