Non-Coding RNA Search

rnca08b_n14.y1

Sequence:


               
               CCTTCTTTTTCTCAGAGCCAACATCTCTGAGCTCATCTCCTTTACTGGTTGAGTGTCTTA
TGCGCACTGAAGGACACAACCACCCAGAAGCACAACATCGACACAGTGGTTGATTTCATG
ACTGTATTGGCTGGCTTAGAACCCTCAAAACCTAAACATCTCACCCACGGGATGTGTGAT
GAAAACCCATAGTTAAGAAACCGTGAAGCAAGACATTTTATGGAAATTAAAAATCTCTCC
CCTTCTTCACAATCCTCCCACGCTGATATACAAAAACATCCGCTCTAGGATTGCTAAGCT
TGGATTTAGCTGAATCATACGTCAGTATGGTTATCCCAAAGGTGAGAAGATATAATCAAT
ACATGGAAACACATCTGAAAGTTGGAGATAAAGAGTTTAAAAACTAGggagttcccgttg
tagtgcagtggaaatgaatccaactaggaaccatgaggtttcgggttcgagtcctggcct
cgctcagcgggttaaggatccagcgttgccatgagacgtggctcggatcttgtgttgctg
tggctgtgatgtaagctggcagctgtagctccga

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTTCTTTTTCTCAGAGCCAACATCTCTGAGCTCATCTCCTTTACTGGTTGAGTGTCTTA
TGCGCACTGAAGGACACAACCACCCAGAAGCACAACATCGACACAGTGGTTGATTTCATG
ACTGTATTGGCTGGCTTAGAACCCTCAAAACCTAAACATCTCACCCACGGGATGTGTGAT
GAAAACCCATAGTTAAGAAACCGTGAAGCAAGACATTTTATGGAAATTAAAAATCTCTCC
CCTTCTTCACAATCCTCCCACGCTGATATACAAAAACATCCGCTCTAGGATTGCTAAGCT
TGGATTTAGCTGAATCATACGTCAGTATGGTTATCCCAAAGGTGAGAAGATATAATCAAT
ACATGGAAACACATCTGAAAGTTGGAGATAAAGAGTTTAAAAACTAGggagttcccgttg
tagtgcagtggaaatgaatccaactaggaaccatgaggtttcgggttcgagtcctggcct
cgctcagcgggttaaggatccagcgttgccatgagacgtggctcggatcttgtgttgctg
tggctgtgatgtaagctggcagctgtagctccga

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-402, gnl|bosTau2|chr29 (21013729-21013324)
               

               
               1-402, gnl|Hg17|chr11 (123994849-123995259)
               

               
               1-402, gnl|Mm7|chr9 (37589878-37589473)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-402, gnl|bosTau2|chr29 (21013729-21013324)
               

               
               1-402, gnl|Hg17|chr11 (123994849-123995259)
               

               
               1-402, gnl|Mm7|chr9 (37589878-37589473)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	1-402, gnl\|bosTau2\|chr29 (21013729-21013324)
	1-402, gnl\|Hg17\|chr11 (123994849-123995259)
	1-402, gnl\|Mm7\|chr9 (37589878-37589473)