rnca18b_k9.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGACTTCATTTACGTCGTGGACACTCGGCCTAAACTTAATGCGATGGCAAATCGTGCTGC AGGGAAAGGCTATGAGAATGAAGACAATTATTCCAATATCAAGTTTCAGTTTATCGGGAT AGAGAACATCCATGTCATGAGGAACAGTCTGCAAAAAATGCTGGAAGTGTGTGAGCTGAA ATCTCCCTCCATGAGTGATTTTCTGTGGGGACTGGAGAACTCTGGCTGGTTGAGGCACAT TAAGGCCATCATGGATGCAGGAATCTTCATAGCAAAGGCAGTTTCAGAGGAAGGGGCCAG CGTGCTTGTTCACTGTTCTGATGGCTGGGACAGAACAGCCCAGGTGTGCTCGGTGGCCAG CCTCCTGCTGGATCCTCACTACCGGACCCTGAAGGGCTTCATGGTATTAATCGAAAAGGA CTGGATTTCCTTGGGTCATAAGTTTAATCACAGATATGGCAACCTAGACGGTGATCCCAA AGAAATCTCTCCAGTTATTGACCAGTTCATTGAGTGTGTCTGGCAGTTAATGGAACAGTT TCCCTGTGCCTTTGAGTTCAACGAGAGGTTTCTGATTCATATTCAACATCACATCTATTC C |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGACTTCATTTACGTCGTGGACACTCGGCCTAAACTTAATGCGATGGCAAATCGTGCTGC AGGGAAAGGCTATGAGAATGAAGACAATTATTCCAATATCAAGTTTCAGTTTATCGGGAT AGAGAACATCCATGTCATGAGGAACAGTCTGCAAAAAATGCTGGAAGTGTGTGAGCTGAA ATCTCCCTCCATGAGTGATTTTCTGTGGGGACTGGAGAACTCTGGCTGGTTGAGGCACAT TAAGGCCATCATGGATGCAGGAATCTTCATAGCAAAGGCAGTTTCAGAGGAAGGGGCCAG CGTGCTTGTTCACTGTTCTGATGGCTGGGACAGAACAGCCCAGGTGTGCTCGGTGGCCAG CCTCCTGCTGGATCCTCACTACCGGACCCTGAAGGGCTTCATGGTATTAATCGAAAAGGA CTGGATTTCCTTGGGTCATAAGTTTAATCACAGATATGGCAACCTAGACGGTGATCCCAA AGAAATCTCTCCAGTTATTGACCAGTTCATTGAGTGTGTCTGGCAGTTAATGGAACAGTT TCCCTGTGCCTTTGAGTTCAACGAGAGGTTTCTGATTCATATTCAACATCACATCTATTC C |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 35-167, gnl|bosTau2|chr27 (12626906-12627038) | |
| 35-167, gnl|canFam2|chr16 (43629180-43629381) | |
| 35-167, gnl|danRer3|chr14 (30487665-30487819) | |
| 35-167, gnl|dasNov1|scaffold_163868 (264-440) | |
| 35-167, gnl|echTel1|scaffold_288995 (40730-40539) | |
| 35-167, gnl|fr1|chrUn (168292175-168291992) | |
| 35-167, gnl|galGal2|chr4 (63612162-63611988) | |
| 35-167, gnl|hg17|chr8 (17233000-17233195) | |
| 35-167, gnl|Hg17|chr8 (17233162-17233030) | |
| 35-167, gnl|loxAfr1|scaffold_17169 (29115-28912) | |
| 35-167, gnl|mm7|chr8 (39371911-39372107) | |
| 35-167, gnl|Mm7|chr8 (39372076-39371944) | |
| 35-167, gnl|monDom2|scaffold_32 (13412185-13412032) | |
| 35-167, gnl|oryCun1|scaffold_198339 (65937-66135) | |
| 35-167, gnl|panTro1|chr7 (17993025-17993220) | |
| 35-167, gnl|rheMac2|chr8 (17200214-17200409) | |
| 35-167, gnl|rn3|chr16 (55043022-55042824) | |
| 35-167, gnl|tetNig1|chr1 (9375741-9375602) | |
| 35-167, gnl|xenTro1|scaffold_979 (294096-293926) | |
| 276-405, gnl|bosTau2|chr27 (12638419-12638548) | |
| 276-405, gnl|canFam2|chr16 (43610429-43610599) | |
| 276-405, gnl|danRer3|chr14 (30483656-30483821) | |
| 276-405, gnl|dasNov1|scaffold_6801 (26142-26306) | |
| 276-405, gnl|echTel1|scaffold_310028 (45891-46059) | |
| 276-405, gnl|fr1|chrUn (168293744-168293584) | |
| 276-405, gnl|galGal2|chr4 (63619008-63618826) | |
| 276-405, gnl|hg17|chr8 (17213382-17213552) | |
| 276-405, gnl|Hg17|chr8 (17213518-17213389) | |
| 276-405, gnl|loxAfr1|scaffold_13864 (16684-16809) | |
| 276-405, gnl|mm7|chr8 (39353090-39353242) | |
| 276-405, gnl|Mm7|chr8 (39353226-39353097) | |
| 276-405, gnl|monDom2|scaffold_32 (13421111-13420971) | |
| 276-405, gnl|oryCun1|scaffold_198339 (46939-47109) | |
| 276-405, gnl|panTro1|chr7 (17973060-17973230) | |
| 276-405, gnl|rheMac2|chr8 (17180475-17180645) | |
| 276-405, gnl|rn3|chr16 (55061380-55061228) | |
| 276-405, gnl|tetNig1|chr1 (9377940-9377794) | |
| 276-405, gnl|xenTro1|scaffold_979 (299223-299059) | |
| 450-601, gnl|bosTau2|chr27 (12642500-12642651) | |
| 450-601, gnl|canFam2|chr16 (43605999-43606218) | |
| 450-601, gnl|danRer3|chr14 (30481884-30482108) | |
| 450-601, gnl|dasNov1|scaffold_6801 (22663-22883) | |
| 450-601, gnl|echTel1|scaffold_288995 (75988-75775) | |
| 450-601, gnl|fr1|chrUn (168294517-168294302) | |
| 450-601, gnl|galGal2|chr4 (63622210-63621988) | |
| 450-601, gnl|hg17|chr8 (17207618-17207847) | |
| 450-601, gnl|Hg17|chr8 (17207841-17207690) | |
| 450-601, gnl|loxAfr1|scaffold_21912 (4205-3986) | |
| 450-601, gnl|mm7|chr8 (39348677-39348895) | |
| 450-601, gnl|Mm7|chr8 (39348889-39348738) | |
| 450-601, gnl|monDom2|scaffold_32 (13424447-13424229) | |
| 450-601, gnl|oryCun1|scaffold_198339 (43704-43924) | |
| 450-601, gnl|panTro1|chr7 (17967331-17967551) | |
| 450-601, gnl|rheMac2|chr8 (17175771-17175991) | |
| 450-601, gnl|rn3|chr16 (55065616-55065398) | |
| 450-601, gnl|tetNig1|chr1 (9379010-9378793) | |
| 450-601, gnl|xenTro1|scaffold_979 (302203-301981) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-167, gnl|bosTau2|chr27 (12626906-12627038) | |
| 35-167, gnl|canFam2|chr16 (43629180-43629381) | |
| 35-167, gnl|danRer3|chr14 (30487665-30487819) | |
| 35-167, gnl|dasNov1|scaffold_163868 (264-440) | |
| 35-167, gnl|echTel1|scaffold_288995 (40730-40539) | |
| 35-167, gnl|fr1|chrUn (168292175-168291992) | |
| 35-167, gnl|galGal2|chr4 (63612162-63611988) | |
| 35-167, gnl|hg17|chr8 (17233000-17233195) | |
| 35-167, gnl|Hg17|chr8 (17233162-17233030) | |
| 35-167, gnl|loxAfr1|scaffold_17169 (29115-28912) | |
| 35-167, gnl|mm7|chr8 (39371911-39372107) | |
| 35-167, gnl|Mm7|chr8 (39372076-39371944) | |
| 35-167, gnl|monDom2|scaffold_32 (13412185-13412032) | |
| 35-167, gnl|oryCun1|scaffold_198339 (65937-66135) | |
| 35-167, gnl|panTro1|chr7 (17993025-17993220) | |
| 35-167, gnl|rheMac2|chr8 (17200214-17200409) | |
| 35-167, gnl|rn3|chr16 (55043022-55042824) | |
| 35-167, gnl|tetNig1|chr1 (9375741-9375602) | |
| 35-167, gnl|xenTro1|scaffold_979 (294096-293926) | |
| 276-405, gnl|bosTau2|chr27 (12638419-12638548) | |
| 276-405, gnl|canFam2|chr16 (43610429-43610599) | |
| 276-405, gnl|danRer3|chr14 (30483656-30483821) | |
| 276-405, gnl|dasNov1|scaffold_6801 (26142-26306) | |
| 276-405, gnl|echTel1|scaffold_310028 (45891-46059) | |
| 276-405, gnl|fr1|chrUn (168293744-168293584) | |
| 276-405, gnl|galGal2|chr4 (63619008-63618826) | |
| 276-405, gnl|hg17|chr8 (17213382-17213552) | |
| 276-405, gnl|Hg17|chr8 (17213518-17213389) | |
| 276-405, gnl|loxAfr1|scaffold_13864 (16684-16809) | |
| 276-405, gnl|mm7|chr8 (39353090-39353242) | |
| 276-405, gnl|Mm7|chr8 (39353226-39353097) | |
| 276-405, gnl|monDom2|scaffold_32 (13421111-13420971) | |
| 276-405, gnl|oryCun1|scaffold_198339 (46939-47109) | |
| 276-405, gnl|panTro1|chr7 (17973060-17973230) | |
| 276-405, gnl|rheMac2|chr8 (17180475-17180645) | |
| 276-405, gnl|rn3|chr16 (55061380-55061228) | |
| 276-405, gnl|tetNig1|chr1 (9377940-9377794) | |
| 276-405, gnl|xenTro1|scaffold_979 (299223-299059) | |
| 450-601, gnl|bosTau2|chr27 (12642500-12642651) | |
| 450-601, gnl|canFam2|chr16 (43605999-43606218) | |
| 450-601, gnl|danRer3|chr14 (30481884-30482108) | |
| 450-601, gnl|dasNov1|scaffold_6801 (22663-22883) | |
| 450-601, gnl|echTel1|scaffold_288995 (75988-75775) | |
| 450-601, gnl|fr1|chrUn (168294517-168294302) | |
| 450-601, gnl|galGal2|chr4 (63622210-63621988) | |
| 450-601, gnl|hg17|chr8 (17207618-17207847) | |
| 450-601, gnl|Hg17|chr8 (17207841-17207690) | |
| 450-601, gnl|loxAfr1|scaffold_21912 (4205-3986) | |
| 450-601, gnl|mm7|chr8 (39348677-39348895) | |
| 450-601, gnl|Mm7|chr8 (39348889-39348738) | |
| 450-601, gnl|monDom2|scaffold_32 (13424447-13424229) | |
| 450-601, gnl|oryCun1|scaffold_198339 (43704-43924) | |
| 450-601, gnl|panTro1|chr7 (17967331-17967551) | |
| 450-601, gnl|rheMac2|chr8 (17175771-17175991) | |
| 450-601, gnl|rn3|chr16 (55065616-55065398) | |
| 450-601, gnl|tetNig1|chr1 (9379010-9378793) | |
| 450-601, gnl|xenTro1|scaffold_979 (302203-301981) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) |