rnco1905b_h10.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTATTCATTGAGTACCCCACGGGCTCGGGCAACGTGTACTCCAGCGCATCTGGTGTGGC CAAGCAGATGTACCAGGACTGTATGAAGGACTTCGGCCGGGGACTCTCCTCCGGCTTCAA GTATCTGGAGTATGAGAAGAAGCACGGCTCCGGGGACTGGCGCCTACTTGGAGATCTGCT GCCCGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGGCGCAGACATGCTGCCCCAGCC CTACCTGGACGCCAGCTGTCCCATGCTGCCCACGGCTCTGGTGAGTTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTATTCATTGAGTACCCCACGGGCTCGGGCAACGTGTACTCCAGCGCATCTGGTGTGGC CAAGCAGATGTACCAGGACTGTATGAAGGACTTCGGCCGGGGACTCTCCTCCGGCTTCAA GTATCTGGAGTATGAGAAGAAGCACGGCTCCGGGGACTGGCGCCTACTTGGAGATCTGCT GCCCGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGGCGCAGACATGCTGCCCCAGCC CTACCTGGACGCCAGCTGTCCCATGCTGCCCACGGCTCTGGTGAGTTTA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 81-200, + strand, RNAz p=0.837876 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 81-200, + strand, RNAz p=0.837876 |
| Predicted microRNA(s): 2 entry(ies) | More info |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
| 133-200, + strand, RNAmicro p=0.948491 | |
| 158-224, - strand, RNAmicro p=0.921634 |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 133-200, + strand, RNAmicro p=0.948491 | |
| 158-224, - strand, RNAmicro p=0.921634 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-289, gnl|bosTau2|chr10 (61707104-61706816) | |
| 1-289, gnl|Hg17|chr14 (76562635-76562347) | |
| 1-289, gnl|Mm7|chr12 (84885306-84885018) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-289, gnl|bosTau2|chr10 (61707104-61706816) | |
| 1-289, gnl|Hg17|chr14 (76562635-76562347) | |
| 1-289, gnl|Mm7|chr12 (84885306-84885018) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |