Non-Coding RNA Search

rnco1916b_j23.y1

Sequence:


               
               GGCGCCAGCCCGACCGAGCGTTGGCCGTGTTCACCAAGTCCGAATAACCAGTTCAGGATG
TCCATCCTGGAGCGGCTGGAGCAGATGGAGAGGAGGATGGCCGAGATGACGGGGTCGCAG
CAGCACAAGCAGGGGGGCAGCGGTGGCGGCGGCGGCGGCAGCGCGGGGGGCACTGGCGGC
GGCACCGGAGGAAGCCAAGCTCGGTGCACGTCGGGCCCTGGGACGCTGGGGAGCTGCTTT
GAGAGCCGCGTGGTCGTGGTGTGTGAGAAGATGATGAGCCGGGCCTGCTGGGCCAAGTCC
AAGCACTTGATCCACTCCAAGACCTTCCGTGGAATGACCCTCCTCCACCTGGCCGCGGCC
CAGGGCTACGCCACCCTCATCCAGACCCTCATCAAGTGGCGCACAAAGCATGCAGACAGC
ATCGATTTGGAGCTGGAGGTCGACCCCTTGAATGTGGACCACTTCTCCTGTACTCCTCTG
ATGTGGGCCTGTGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGCCAGCCCGACCGAGCGTTGGCCGTGTTCACCAAGTCCGAATAACCAGTTCAGGATG
TCCATCCTGGAGCGGCTGGAGCAGATGGAGAGGAGGATGGCCGAGATGACGGGGTCGCAG
CAGCACAAGCAGGGGGGCAGCGGTGGCGGCGGCGGCGGCAGCGCGGGGGGCACTGGCGGC
GGCACCGGAGGAAGCCAAGCTCGGTGCACGTCGGGCCCTGGGACGCTGGGGAGCTGCTTT
GAGAGCCGCGTGGTCGTGGTGTGTGAGAAGATGATGAGCCGGGCCTGCTGGGCCAAGTCC
AAGCACTTGATCCACTCCAAGACCTTCCGTGGAATGACCCTCCTCCACCTGGCCGCGGCC
CAGGGCTACGCCACCCTCATCCAGACCCTCATCAAGTGGCGCACAAAGCATGCAGACAGC
ATCGATTTGGAGCTGGAGGTCGACCCCTTGAATGTGGACCACTTCTCCTGTACTCCTCTG
ATGTGGGCCTGTGCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47188803|emb|CAG14669.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47188803|emb|CAG14669.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               204-401, gnl|bosTau2|chr16 (29829969-29830166)
               

               
               204-401, gnl|Hg17|chr1 (7730669-7730866)
               

               
               204-401, gnl|Mm7|chr4 (150075753-150075556)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               204-401, gnl|bosTau2|chr16 (29829969-29830166)
               

               
               204-401, gnl|Hg17|chr1 (7730669-7730866)
               

               
               204-401, gnl|Mm7|chr4 (150075753-150075556)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	204-401, gnl\|bosTau2\|chr16 (29829969-29830166)
	204-401, gnl\|Hg17\|chr1 (7730669-7730866)
	204-401, gnl\|Mm7\|chr4 (150075753-150075556)