Non-Coding RNA Search

rnco1919b_f12.y1

Sequence:


               
               TGATGCGTCCATCATGCCCAGGGTAGTCAGCGGCAACCTGAACGCCCCCACCATCATGAT
GGCAGAGAAGGCCGCCGACATCATCAGGGGCCGGCCAGCACTCTGGGATGAGGATGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATGCGTCCATCATGCCCAGGGTAGTCAGCGGCAACCTGAACGCCCCCACCATCATGAT
GGCAGAGAAGGCCGCCGACATCATCAGGGGCCGGCCAGCACTCTGGGATGAGGATGTCC

Aligned organism(s): 17 entry(ies)

More info

Aligned organism(s): 17 entry(ies)

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               2-119, gnl|bosTau2|chr22 (35971551-35971668)
               

               
               2-119, gnl|canFam2|chr20 (39181910-39181777)
               

               
               2-119, gnl|danRer3|chr9 (22070577-22070669)
               

               
               2-119, gnl|echTel1|scaffold_292293 (285334-285467)
               

               
               2-119, gnl|fr1|chrUn (281747244-281747111)
               

               
               2-119, gnl|galGal2|chr12 (7278588-7278721)
               

               
               2-119, gnl|hg17|chr3 (53826845-53826978)
               

               
               2-119, gnl|Hg17|chr3 (53826999-53826882)
               

               
               2-119, gnl|mm7|chr14 (27466603-27466470)
               

               
               2-119, gnl|Mm7|chr14 (27466447-27466564)
               

               
               2-119, gnl|monDom2|scaffold_76 (3942364-3942231)
               

               
               2-119, gnl|oryCun1|scaffold_203207 (132519-132386)
               

               
               2-119, gnl|panTro1|chr2 (55475436-55475569)
               

               
               2-119, gnl|rheMac2|chr2 (82523763-82523630)
               

               
               2-119, gnl|rn3|chr16 (5379441-5379308)
               

               
               2-119, gnl|tetNig1|chr9 (957001-956868)
               

               
               2-119, gnl|xenTro1|scaffold_678 (678350-678483)

Aligned organism(s): 17 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-119, gnl|bosTau2|chr22 (35971551-35971668)
               

               
               2-119, gnl|canFam2|chr20 (39181910-39181777)
               

               
               2-119, gnl|danRer3|chr9 (22070577-22070669)
               

               
               2-119, gnl|echTel1|scaffold_292293 (285334-285467)
               

               
               2-119, gnl|fr1|chrUn (281747244-281747111)
               

               
               2-119, gnl|galGal2|chr12 (7278588-7278721)
               

               
               2-119, gnl|hg17|chr3 (53826845-53826978)
               

               
               2-119, gnl|Hg17|chr3 (53826999-53826882)
               

               
               2-119, gnl|mm7|chr14 (27466603-27466470)
               

               
               2-119, gnl|Mm7|chr14 (27466447-27466564)
               

               
               2-119, gnl|monDom2|scaffold_76 (3942364-3942231)
               

               
               2-119, gnl|oryCun1|scaffold_203207 (132519-132386)
               

               
               2-119, gnl|panTro1|chr2 (55475436-55475569)
               

               
               2-119, gnl|rheMac2|chr2 (82523763-82523630)
               

               
               2-119, gnl|rn3|chr16 (5379441-5379308)
               

               
               2-119, gnl|tetNig1|chr9 (957001-956868)
               

               
               2-119, gnl|xenTro1|scaffold_678 (678350-678483)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	2-119, gnl\|bosTau2\|chr22 (35971551-35971668)
	2-119, gnl\|canFam2\|chr20 (39181910-39181777)
	2-119, gnl\|danRer3\|chr9 (22070577-22070669)
	2-119, gnl\|echTel1\|scaffold_292293 (285334-285467)
	2-119, gnl\|fr1\|chrUn (281747244-281747111)
	2-119, gnl\|galGal2\|chr12 (7278588-7278721)
	2-119, gnl\|hg17\|chr3 (53826845-53826978)
	2-119, gnl\|Hg17\|chr3 (53826999-53826882)
	2-119, gnl\|mm7\|chr14 (27466603-27466470)
	2-119, gnl\|Mm7\|chr14 (27466447-27466564)
	2-119, gnl\|monDom2\|scaffold_76 (3942364-3942231)
	2-119, gnl\|oryCun1\|scaffold_203207 (132519-132386)
	2-119, gnl\|panTro1\|chr2 (55475436-55475569)
	2-119, gnl\|rheMac2\|chr2 (82523763-82523630)
	2-119, gnl\|rn3\|chr16 (5379441-5379308)
	2-119, gnl\|tetNig1\|chr9 (957001-956868)
	2-119, gnl\|xenTro1\|scaffold_678 (678350-678483)