Non-Coding RNA Search

rnco1922b_h23.y1

Sequence:


               
               CTCTCCTTCTGTCTGCTCCCTGCTTAGCCCTCGGTTTTCTCATTCCTCTGAAGTTCTCTT
AGAGCAGCCCCTGTTAGTAGGCTGGCAAGGGAATTTCTGGTGACTAGTTCCTTAGTTAGG
TCTTAGCAATCAAACCAAATCGATGTCTCCCATAATTCTCCTCTGTGTTCATGTGTGTGA
GAGTGTGTGTGTGTCTCTTGGTTTGGGGTAGAGGGGAGGGAGGGGTAGGACTGGAATCTC
TAGGGTGTATGGGTAGATAGGGTGCACAGTTAGTTCTGTGTGGGGGCCTTTATGTAAAAC
AAAACTCTGAGGGTGTCTGTTTTGGGGGTGAAGATGAGTATCACCACTTCCTCCCTAACC
ATCTGGCCTAGACACCGTTTGCCCTGGGGCCGTCTGCTCCCAGGAAGGCTTTAGGAGAAT
AGTCTAGGATGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTCCTTCTGTCTGCTCCCTGCTTAGCCCTCGGTTTTCTCATTCCTCTGAAGTTCTCTT
AGAGCAGCCCCTGTTAGTAGGCTGGCAAGGGAATTTCTGGTGACTAGTTCCTTAGTTAGG
TCTTAGCAATCAAACCAAATCGATGTCTCCCATAATTCTCCTCTGTGTTCATGTGTGTGA
GAGTGTGTGTGTGTCTCTTGGTTTGGGGTAGAGGGGAGGGAGGGGTAGGACTGGAATCTC
TAGGGTGTATGGGTAGATAGGGTGCACAGTTAGTTCTGTGTGGGGGCCTTTATGTAAAAC
AAAACTCTGAGGGTGTCTGTTTTGGGGGTGAAGATGAGTATCACCACTTCCTCCCTAACC
ATCTGGCCTAGACACCGTTTGCCCTGGGGCCGTCTGCTCCCAGGAAGGCTTTAGGAGAAT
AGTCTAGGATGAG

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               5-259, gnl|bosTau2|chr19 (4315984-4316237)
               

               
               5-259, gnl|Hg17|chr17 (53522414-53522707)
               

               
               5-259, gnl|Mm7|chr11 (88050613-88050354)
               


               
               302-433, gnl|bosTau2|chr19 (4316252-4316377)
               

               
               302-433, gnl|canFam2|chr9 (36091804-36092145)
               

               
               302-433, gnl|dasNov1|scaffold_26775 (3763-3447)
               

               
               302-433, gnl|echTel1|scaffold_300222 (8404-8688)
               

               
               302-433, gnl|hg17|chr17 (53522609-53522945)
               

               
               302-433, gnl|Hg17|chr17 (53522724-53522857)
               

               
               302-433, gnl|loxAfr1|scaffold_28862 (38665-38991)
               

               
               302-433, gnl|mm7|chr11 (88050435-88050124)
               

               
               302-433, gnl|Mm7|chr11 (88050333-88050191)
               

               
               302-433, gnl|monDom2|scaffold_56 (5290477-5290180)
               

               
               302-433, gnl|oryCun1|scaffold_192798 (11391-11075)
               

               
               302-433, gnl|rheMac2|chr16 (42317685-42318019)
               

               
               302-433, gnl|rn3|chr10 (76279178-76278859)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-259, gnl|bosTau2|chr19 (4315984-4316237)
               

               
               5-259, gnl|Hg17|chr17 (53522414-53522707)
               

               
               5-259, gnl|Mm7|chr11 (88050613-88050354)
               


               
               302-433, gnl|bosTau2|chr19 (4316252-4316377)
               

               
               302-433, gnl|canFam2|chr9 (36091804-36092145)
               

               
               302-433, gnl|dasNov1|scaffold_26775 (3763-3447)
               

               
               302-433, gnl|echTel1|scaffold_300222 (8404-8688)
               

               
               302-433, gnl|hg17|chr17 (53522609-53522945)
               

               
               302-433, gnl|Hg17|chr17 (53522724-53522857)
               

               
               302-433, gnl|loxAfr1|scaffold_28862 (38665-38991)
               

               
               302-433, gnl|mm7|chr11 (88050435-88050124)
               

               
               302-433, gnl|Mm7|chr11 (88050333-88050191)
               

               
               302-433, gnl|monDom2|scaffold_56 (5290477-5290180)
               

               
               302-433, gnl|oryCun1|scaffold_192798 (11391-11075)
               

               
               302-433, gnl|rheMac2|chr16 (42317685-42318019)
               

               
               302-433, gnl|rn3|chr10 (76279178-76278859)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nco (0.161734)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	5-259, gnl\|bosTau2\|chr19 (4315984-4316237)
	5-259, gnl\|Hg17\|chr17 (53522414-53522707)
	5-259, gnl\|Mm7\|chr11 (88050613-88050354)

	302-433, gnl\|bosTau2\|chr19 (4316252-4316377)
	302-433, gnl\|canFam2\|chr9 (36091804-36092145)
	302-433, gnl\|dasNov1\|scaffold_26775 (3763-3447)
	302-433, gnl\|echTel1\|scaffold_300222 (8404-8688)
	302-433, gnl\|hg17\|chr17 (53522609-53522945)
	302-433, gnl\|Hg17\|chr17 (53522724-53522857)
	302-433, gnl\|loxAfr1\|scaffold_28862 (38665-38991)
	302-433, gnl\|mm7\|chr11 (88050435-88050124)
	302-433, gnl\|Mm7\|chr11 (88050333-88050191)
	302-433, gnl\|monDom2\|scaffold_56 (5290477-5290180)
	302-433, gnl\|oryCun1\|scaffold_192798 (11391-11075)
	302-433, gnl\|rheMac2\|chr16 (42317685-42318019)
	302-433, gnl\|rn3\|chr10 (76279178-76278859)