Non-Coding RNA Search

rnco1927b_h4.y1

Sequence:


               
               CCGAGTTGGGGTTCAGAGCCTTCCTGGCCCGCAGGGGGACTGCGTTCCTACCCTAGCAGG
GCCGGGAGCAGACTTTCCTCAATATGGGGCTGGAGGCCCAGAGGCTGCCAGCGGCCGAGA
AGGCCCCAGTGAGGGTGGCCCTTCGAGTCCGCCCGCTGCTTCCCAAGGAGCTGCTGCATG
GGCACCAGAGCTGCCTGAGGGTGGAGCCGGGGCATGGCGGAGTCACCCTGGGCCGAGACC
GCCACTTTGGCTTCCATGTAGTGCTGGACGAGGATGCCGGGCAGGAGACTGTATACCAGG
CCTGTGTGCAGCCCCTCCTGGAGGCTTTCTTTGAGGGCTTCAATGCCACCGTCTTTGCCT
ACGGTCAGACAGGCTCTGGGAAGACGTACACCATGGGAGAGACCAGTGTCGCCTCCCTTC
ATGAGGATGAACAGGGCATCATCCCGCGGGCCATGGCTGAGGCCTTCAAGCTGATTGATG
AGAACGACCTGCTTGACTGTCTGGTGCACGTGTCCTACCTGGAAGTGTACAAGGAGGAGT
TCCGGGACCTGCTGGAGGTGGGCACTGCCAGCCGTGACATCCAGCTTCGGGAGGATGATC
GCGGGAATGTTGGTGAGGAACTCCTGGGTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGAGTTGGGGTTCAGAGCCTTCCTGGCCCGCAGGGGGACTGCGTTCCTACCCTAGCAGG
GCCGGGAGCAGACTTTCCTCAATATGGGGCTGGAGGCCCAGAGGCTGCCAGCGGCCGAGA
AGGCCCCAGTGAGGGTGGCCCTTCGAGTCCGCCCGCTGCTTCCCAAGGAGCTGCTGCATG
GGCACCAGAGCTGCCTGAGGGTGGAGCCGGGGCATGGCGGAGTCACCCTGGGCCGAGACC
GCCACTTTGGCTTCCATGTAGTGCTGGACGAGGATGCCGGGCAGGAGACTGTATACCAGG
CCTGTGTGCAGCCCCTCCTGGAGGCTTTCTTTGAGGGCTTCAATGCCACCGTCTTTGCCT
ACGGTCAGACAGGCTCTGGGAAGACGTACACCATGGGAGAGACCAGTGTCGCCTCCCTTC
ATGAGGATGAACAGGGCATCATCCCGCGGGCCATGGCTGAGGCCTTCAAGCTGATTGATG
AGAACGACCTGCTTGACTGTCTGGTGCACGTGTCCTACCTGGAAGTGTACAAGGAGGAGT
TCCGGGACCTGCTGGAGGTGGGCACTGCCAGCCGTGACATCCAGCTTCGGGAGGATGATC
GCGGGAATGTTGGTGAGGAACTCCTGGGTCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|2443286|dbj|BAA22395.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2443286|dbj|BAA22395.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               45-409, gnl|bosTau2|chr21 (15569373-15569737)
               

               
               45-409, gnl|Hg17|chr15 (87997204-87996840)
               

               
               45-409, gnl|Mm7|chr7 (75582492-75582128)
               


               
               411-633, gnl|bosTau2|chr21 (15571171-15571393)
               

               
               411-633, gnl|Hg17|chr15 (87994177-87993955)
               

               
               411-633, gnl|Mm7|chr7 (75579910-75579687)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-409, gnl|bosTau2|chr21 (15569373-15569737)
               

               
               45-409, gnl|Hg17|chr15 (87997204-87996840)
               

               
               45-409, gnl|Mm7|chr7 (75582492-75582128)
               


               
               411-633, gnl|bosTau2|chr21 (15571171-15571393)
               

               
               411-633, gnl|Hg17|chr15 (87994177-87993955)
               

               
               411-633, gnl|Mm7|chr7 (75579910-75579687)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	45-409, gnl\|bosTau2\|chr21 (15569373-15569737)
	45-409, gnl\|Hg17\|chr15 (87997204-87996840)
	45-409, gnl\|Mm7\|chr7 (75582492-75582128)

	411-633, gnl\|bosTau2\|chr21 (15571171-15571393)
	411-633, gnl\|Hg17\|chr15 (87994177-87993955)
	411-633, gnl\|Mm7\|chr7 (75579910-75579687)