Non-Coding RNA Search

rnco1938b_j1.y1

Sequence:


               
               AAAACATTGAAAAGAATCAGCATGTTATACATGGCCAAGCTGGGACCAGATGTCATCACT
GAAGAGATCAACATTGATGATGGACGATTCAGCCATGGACCCGGCGGGTGCGGCCGAGAC
ATGTGTCTCCGTACAGTGTCAGAAGCAAATCAAAGAACTTCGAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACATTGAAAAGAATCAGCATGTTATACATGGCCAAGCTGGGACCAGATGTCATCACT
GAAGAGATCAACATTGATGATGGACGATTCAGCCATGGACCCGGCGGGTGCGGCCGAGAC
ATGTGTCTCCGTACAGTGTCAGAAGCAAATCAAAGAACTTCGAGAT

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               1-155, gnl|bosTau2|chr26 (24190030-24189877)
               

               
               1-155, gnl|canFam2|chr28 (30483071-30483293)
               

               
               1-155, gnl|dasNov1|scaffold_891 (11582-11363)
               

               
               1-155, gnl|echTel1|scaffold_159073 (4575-4351)
               

               
               1-155, gnl|galGal2|chr6 (28065390-28065602)
               

               
               1-155, gnl|hg17|chr10 (118703506-118703730)
               

               
               1-155, gnl|Hg17|chr10 (118703696-118703543)
               

               
               1-155, gnl|loxAfr1|scaffold_241 (86267-86488)
               

               
               1-155, gnl|mm7|chr19 (58960409-58960631)
               

               
               1-155, gnl|Mm7|chr19 (58960593-58960440)
               

               
               1-155, gnl|monDom2|scaffold_14 (44283603-44283382)
               

               
               1-155, gnl|oryCun1|scaffold_205400 (158339-158564)
               

               
               1-155, gnl|panTro1|chr8 (120891523-120891747)
               

               
               1-155, gnl|rheMac2|chr9 (116587207-116587431)
               

               
               1-155, gnl|rn3|chr1 (265768655-265768876)
               

               
               1-155, gnl|xenTro1|scaffold_1012 (275792-276028)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-155, gnl|bosTau2|chr26 (24190030-24189877)
               

               
               1-155, gnl|canFam2|chr28 (30483071-30483293)
               

               
               1-155, gnl|dasNov1|scaffold_891 (11582-11363)
               

               
               1-155, gnl|echTel1|scaffold_159073 (4575-4351)
               

               
               1-155, gnl|galGal2|chr6 (28065390-28065602)
               

               
               1-155, gnl|hg17|chr10 (118703506-118703730)
               

               
               1-155, gnl|Hg17|chr10 (118703696-118703543)
               

               
               1-155, gnl|loxAfr1|scaffold_241 (86267-86488)
               

               
               1-155, gnl|mm7|chr19 (58960409-58960631)
               

               
               1-155, gnl|Mm7|chr19 (58960593-58960440)
               

               
               1-155, gnl|monDom2|scaffold_14 (44283603-44283382)
               

               
               1-155, gnl|oryCun1|scaffold_205400 (158339-158564)
               

               
               1-155, gnl|panTro1|chr8 (120891523-120891747)
               

               
               1-155, gnl|rheMac2|chr9 (116587207-116587431)
               

               
               1-155, gnl|rn3|chr1 (265768655-265768876)
               

               
               1-155, gnl|xenTro1|scaffold_1012 (275792-276028)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nco (0.161734)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	1-155, gnl\|bosTau2\|chr26 (24190030-24189877)
	1-155, gnl\|canFam2\|chr28 (30483071-30483293)
	1-155, gnl\|dasNov1\|scaffold_891 (11582-11363)
	1-155, gnl\|echTel1\|scaffold_159073 (4575-4351)
	1-155, gnl\|galGal2\|chr6 (28065390-28065602)
	1-155, gnl\|hg17\|chr10 (118703506-118703730)
	1-155, gnl\|Hg17\|chr10 (118703696-118703543)
	1-155, gnl\|loxAfr1\|scaffold_241 (86267-86488)
	1-155, gnl\|mm7\|chr19 (58960409-58960631)
	1-155, gnl\|Mm7\|chr19 (58960593-58960440)
	1-155, gnl\|monDom2\|scaffold_14 (44283603-44283382)
	1-155, gnl\|oryCun1\|scaffold_205400 (158339-158564)
	1-155, gnl\|panTro1\|chr8 (120891523-120891747)
	1-155, gnl\|rheMac2\|chr9 (116587207-116587431)
	1-155, gnl\|rn3\|chr1 (265768655-265768876)
	1-155, gnl\|xenTro1\|scaffold_1012 (275792-276028)