rnco1938b_k22.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGAGAATTGATGGTTGGAATGGGAGCACATAGGTCCTGGGAATGGTGTGTAGTGCCACG AAAGGTTGGATTTGATGATCTCTGAGGTCCCTTCCAGCCCTGTCACTCTAGGACTCCCTC CTTCCTTCATTCCATTGGCAAACCCCTCCCCTTGAAGCAGCTTTGCCTGCTGCCACCAAT TACGTGTAGGGCTGGAGAACAAGTGCAAACTTGCCATCTTCTTTGCCCCAAACAGGAGTG TGGTTTAAAAAAAAAAAAGAAGAACAAGAAAGAAAAGGAATTGGAGGATGCCAGATGGTG CCTGATCTACATGGGGGCACAGAGAGCTGATTAGCCCCCCCAAGGCAGGGAAGGGCGATG GCATGGCGCCTTGCTCTGCCTCTGCCTTGCTTTGGACACTGGTGGGCGCTCCAGTGGGCC CCTAGGGAGGCGGGGCTCCAGCCTGCCTTTACACCACAGATGAGGTGGGCATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGAGAATTGATGGTTGGAATGGGAGCACATAGGTCCTGGGAATGGTGTGTAGTGCCACG AAAGGTTGGATTTGATGATCTCTGAGGTCCCTTCCAGCCCTGTCACTCTAGGACTCCCTC CTTCCTTCATTCCATTGGCAAACCCCTCCCCTTGAAGCAGCTTTGCCTGCTGCCACCAAT TACGTGTAGGGCTGGAGAACAAGTGCAAACTTGCCATCTTCTTTGCCCCAAACAGGAGTG TGGTTTAAAAAAAAAAAAGAAGAACAAGAAAGAAAAGGAATTGGAGGATGCCAGATGGTG CCTGATCTACATGGGGGCACAGAGAGCTGATTAGCCCCCCCAAGGCAGGGAAGGGCGATG GCATGGCGCCTTGCTCTGCCTCTGCCTTGCTTTGGACACTGGTGGGCGCTCCAGTGGGCC CCTAGGGAGGCGGGGCTCCAGCCTGCCTTTACACCACAGATGAGGTGGGCATA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 116-235, - strand, RNAz p=0.988427 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 116-235, - strand, RNAz p=0.988427 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-269, gnl|bosTau2|chr23 (9329999-9329732) | |
| 1-269, gnl|Hg17|chr6 (35288071-35287797) | |
| 1-269, gnl|Mm7|chr17 (26326413-26326145) | |
| 292-404, gnl|bosTau2|chr23 (9329735-9329625) | |
| 292-404, gnl|Hg17|chr6 (35287800-35287676) | |
| 292-404, gnl|Mm7|chr17 (26326148-26326041) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-269, gnl|bosTau2|chr23 (9329999-9329732) | |
| 1-269, gnl|Hg17|chr6 (35288071-35287797) | |
| 1-269, gnl|Mm7|chr17 (26326413-26326145) | |
| 292-404, gnl|bosTau2|chr23 (9329735-9329625) | |
| 292-404, gnl|Hg17|chr6 (35287800-35287676) | |
| 292-404, gnl|Mm7|chr17 (26326148-26326041) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |