Non-Coding RNA Search

rnep21c_g10.y1

Sequence:


               
               CTTTATGGTGCCTCTTTTACCCACTCAGGTGCAGGCAGAAATGATGTGGCCTGTGGAAGG
CACCCAGCAGGGGAGCCCACATTTTACAGTCACCACGCCACCACCTTCCTGCCCGTAGGT
CTTAAGGCAGGATAATGGCACAGCCAAGGCTGATGCAGAACAAGAAGCACTGGATAGTGG
CGGTCCCTTGGATGGTGAAAGCCCCCAGCAGCTCTGAACAAGGGTCCAGCCAGGCCTCTG
TGACCAGGCTAGGGGGGAGTGAGCCTGCGGAGAGCAGTTGTTTTAGTCAGGCCCTGAATG
CTGGGATGGGCTGTTGGCTGGGCCCCCTCATCAGTCTTGGCATCTGCCTCAGTTGCGATA
CTGTTGCAGAAAGCAAGAGCTGCTTTGGCGAGTTTAATTAGACAAGGATTTATTACCAGG
TCCCCAGTGGCTTTGCAAAGTCCCTGGAAAGGCTGGAGGAGCAGACGCTGCTGAATGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTATGGTGCCTCTTTTACCCACTCAGGTGCAGGCAGAAATGATGTGGCCTGTGGAAGG
CACCCAGCAGGGGAGCCCACATTTTACAGTCACCACGCCACCACCTTCCTGCCCGTAGGT
CTTAAGGCAGGATAATGGCACAGCCAAGGCTGATGCAGAACAAGAAGCACTGGATAGTGG
CGGTCCCTTGGATGGTGAAAGCCCCCAGCAGCTCTGAACAAGGGTCCAGCCAGGCCTCTG
TGACCAGGCTAGGGGGGAGTGAGCCTGCGGAGAGCAGTTGTTTTAGTCAGGCCCTGAATG
CTGGGATGGGCTGTTGGCTGGGCCCCCTCATCAGTCTTGGCATCTGCCTCAGTTGCGATA
CTGTTGCAGAAAGCAAGAGCTGCTTTGGCGAGTTTAATTAGACAAGGATTTATTACCAGG
TCCCCAGTGGCTTTGCAAAGTCCCTGGAAAGGCTGGAGGAGCAGACGCTGCTGAATGTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               189-480, gnl|bosTau2|chr2 (71672127-71671843)
               

               
               189-480, gnl|Hg17|chr1 (33281126-33280824)
               

               
               189-480, gnl|Mm7|chr4 (128354895-128355199)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               189-480, gnl|bosTau2|chr2 (71672127-71671843)
               

               
               189-480, gnl|Hg17|chr1 (33281126-33280824)
               

               
               189-480, gnl|Mm7|chr4 (128354895-128355199)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	189-480, gnl\|bosTau2\|chr2 (71672127-71671843)
	189-480, gnl\|Hg17\|chr1 (33281126-33280824)
	189-480, gnl\|Mm7\|chr4 (128354895-128355199)