Non-Coding RNA Search

rnep27c_e6.y1

Sequence:


               
               GAGGCCCAGCCACAGCTCTTCTAGTTCCAACATCTACCAGTCGGGAGCATCCTCGGCCAT
GGTGTTCCAGCCAGTGGGCTCTGGTGGGGTCCAGCCCTGTGGCGTTGGCTCTAGCGGCTC
TAAAGGGCCCTGCTCCCTCTCCGGTTCTGGAGTCCACAGCAGTTCTAGCATTTCAAGCAG
TTCTGGTTCATCCTTCCATCCCTGTGGCACTGTTTCCCAGGGGCCCTGCTCGCCGCCTGG
CACCGGCTCTTTCAGTGGCAGCTCCAGCTCGAAATCTGGTGGCAAAATCATCCTTCAGCC
CTGTGGCAGCAAGTCCAGCTCTTCTGGCCACCCTTGCATTTCTGTCTCCTCCTCGACCTT
GAGCGGGGGTCCAGATGGCTCTCCCCAACCTGATCCCTCAGCTGGTGCCAAGCCCTGTGG
TTCCGGCAGCTCTGGAAAGATCCCCTGCCGCTCCATCCGGGACATCCTAGCCAAAGTGAA
GCCTCTGGGGCCCCAGCTAGCTGACCCCGAGGTCTTCCTACCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCCCAGCCACAGCTCTTCTAGTTCCAACATCTACCAGTCGGGAGCATCCTCGGCCAT
GGTGTTCCAGCCAGTGGGCTCTGGTGGGGTCCAGCCCTGTGGCGTTGGCTCTAGCGGCTC
TAAAGGGCCCTGCTCCCTCTCCGGTTCTGGAGTCCACAGCAGTTCTAGCATTTCAAGCAG
TTCTGGTTCATCCTTCCATCCCTGTGGCACTGTTTCCCAGGGGCCCTGCTCGCCGCCTGG
CACCGGCTCTTTCAGTGGCAGCTCCAGCTCGAAATCTGGTGGCAAAATCATCCTTCAGCC
CTGTGGCAGCAAGTCCAGCTCTTCTGGCCACCCTTGCATTTCTGTCTCCTCCTCGACCTT
GAGCGGGGGTCCAGATGGCTCTCCCCAACCTGATCCCTCAGCTGGTGCCAAGCCCTGTGG
TTCCGGCAGCTCTGGAAAGATCCCCTGCCGCTCCATCCGGGACATCCTAGCCAAAGTGAA
GCCTCTGGGGCCCCAGCTAGCTGACCCCGAGGTCTTCCTACCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               CDSN_PIG

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               CDSN_PIG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-524, gnl|bosTau2|chr23 (20520231-20520750)
               

               
               5-524, gnl|Hg17|chr6 (31192299-31191807)
               

               
               5-524, gnl|Mm7|chr17 (33657675-33658182)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-524, gnl|bosTau2|chr23 (20520231-20520750)
               

               
               5-524, gnl|Hg17|chr6 (31192299-31191807)
               

               
               5-524, gnl|Mm7|chr17 (33657675-33658182)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nep (0.183925)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	5-524, gnl\|bosTau2\|chr23 (20520231-20520750)
	5-524, gnl\|Hg17\|chr6 (31192299-31191807)
	5-524, gnl\|Mm7\|chr17 (33657675-33658182)