rnje03c_j18.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTTTCCCTTCCTGCTTCCCTACAAGTCCCAGCAGGGGCTGGAAGCCCTCCTGGGCCAT GGGCGCAGCATCGTGTTCCTAGAGACCTCTGAGAGAACAGAGCCATCACCGCTGGTCTCC TGTGCTGTAGAGTCTGCGGCCAAGGTTTACCCTGAGCAGCCTGTGCTGTTGCTTTTGAAG GGTCTCACCAATTCCACGCAGCTGCTCTCAAACTCCACGTCCCCAGCCCTTTCCCTCCTC TCAGCCATAGACAATGTTTTCCTCTTCCCTTTGGATATGAAAAGCTTGTTTGAAGACACA CCGTTGTTTTCCTGGTACACTCGAGTAAGTATTCAGAGAAACTTAGAATGTCAGTGTGGG ACCACAGAAAATGGGCCCAATCTAGTCATTTTACAGATGGGTACACTGAGGGTAAAGACT GAGTGTCAGAAATGGGACTAGAACCCAGATTCTTTGCCTCTTGCCTGGCCTTCTTTCTAC AGTGCTGAGTCCTGACTCAAGGAAACAGGAGAGAATTTAGGCTTATCTTTACCCTGGTGC CTTTTGCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTTTCCCTTCCTGCTTCCCTACAAGTCCCAGCAGGGGCTGGAAGCCCTCCTGGGCCAT GGGCGCAGCATCGTGTTCCTAGAGACCTCTGAGAGAACAGAGCCATCACCGCTGGTCTCC TGTGCTGTAGAGTCTGCGGCCAAGGTTTACCCTGAGCAGCCTGTGCTGTTGCTTTTGAAG GGTCTCACCAATTCCACGCAGCTGCTCTCAAACTCCACGTCCCCAGCCCTTTCCCTCCTC TCAGCCATAGACAATGTTTTCCTCTTCCCTTTGGATATGAAAAGCTTGTTTGAAGACACA CCGTTGTTTTCCTGGTACACTCGAGTAAGTATTCAGAGAAACTTAGAATGTCAGTGTGGG ACCACAGAAAATGGGCCCAATCTAGTCATTTTACAGATGGGTACACTGAGGGTAAAGACT GAGTGTCAGAAATGGGACTAGAACCCAGATTCTTTGCCTCTTGCCTGGCCTTCTTTCTAC AGTGCTGAGTCCTGACTCAAGGAAACAGGAGAGAATTTAGGCTTATCTTTACCCTGGTGC CTTTTGCTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 300-414, + strand, RNAz p=0.965467 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 300-414, + strand, RNAz p=0.965467 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 9-414, gnl|bosTau2|chr1 (82379199-82379609) | |
| 9-414, gnl|Hg17|chr3 (139332701-139332329) | |
| 9-414, gnl|Mm7|chr9 (99256602-99256959) | |
| 416-549, gnl|bosTau2|chr1 (82379764-82379900) | |
| 416-549, gnl|Hg17|chr3 (139332304-139332189) | |
| 416-549, gnl|Mm7|chr9 (99257023-99257140) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-414, gnl|bosTau2|chr1 (82379199-82379609) | |
| 9-414, gnl|Hg17|chr3 (139332701-139332329) | |
| 9-414, gnl|Mm7|chr9 (99256602-99256959) | |
| 416-549, gnl|bosTau2|chr1 (82379764-82379900) | |
| 416-549, gnl|Hg17|chr3 (139332304-139332189) | |
| 416-549, gnl|Mm7|chr9 (99257023-99257140) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |