rnje19c_m6.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGCTCGGAGCTGCCACCATGGGAATGTCCGTGCCACAGAGCTGCTTCGGTTATCCCTT GAGCATCTTCTTCATCGTGGTCAACGAGTTCTGTGAAAGGTTTTCCTACTATGGAATGAG AGCACTCCTGATCCTGTACTTCCGGCTTTTCATCGGCTGGAATGACAATCTGTCCACTGC CATCTACCACACCTTTGTGGCTCTGTGCTACCTGACGCCCATTCTAGGAGCCCTCATCGC CGACTCCTGGCTGGGGAAGTTCAAGACAATTGTGTCGTTGTCCATCGTCTACACCATTGG ACAGGTGGTCATGGCCGTGAGCTCCATCAATGACCTCACAGACTTCGACCACAACGGAAC CCCCAACAGCATGTCTGTGCACGTGGCGCTGTCCATGATCGGCCTGGCCCTGATTGCTCT GGGTACTGGCGGGATAAAGCCCTGTGTGTCGGCCTTTGGGGGCGATCAGTTTGAAGAGGG CCAGGAAAAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGCTCGGAGCTGCCACCATGGGAATGTCCGTGCCACAGAGCTGCTTCGGTTATCCCTT GAGCATCTTCTTCATCGTGGTCAACGAGTTCTGTGAAAGGTTTTCCTACTATGGAATGAG AGCACTCCTGATCCTGTACTTCCGGCTTTTCATCGGCTGGAATGACAATCTGTCCACTGC CATCTACCACACCTTTGTGGCTCTGTGCTACCTGACGCCCATTCTAGGAGCCCTCATCGC CGACTCCTGGCTGGGGAAGTTCAAGACAATTGTGTCGTTGTCCATCGTCTACACCATTGG ACAGGTGGTCATGGCCGTGAGCTCCATCAATGACCTCACAGACTTCGACCACAACGGAAC CCCCAACAGCATGTCTGTGCACGTGGCGCTGTCCATGATCGGCCTGGCCCTGATTGCTCT GGGTACTGGCGGGATAAAGCCCTGTGTGTCGGCCTTTGGGGGCGATCAGTTTGAAGAGGG CCAGGAAAAGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 121-265, gnl|bosTau2|chr12 (40880504-40880648) | |
| 121-265, gnl|canFam2|chr22 (51757932-51758121) | |
| 121-265, gnl|danRer3|chr6 (7915505-7915708) | |
| 121-265, gnl|dasNov1|scaffold_48323 (7314-7123) | |
| 121-265, gnl|echTel1|scaffold_183801 (2217-2411) | |
| 121-265, gnl|fr1|chrUn (19333991-19334166) | |
| 121-265, gnl|galGal2|chr1 (137461005-137460819) | |
| 121-265, gnl|hg17|chr13 (98176374-98176563) | |
| 121-265, gnl|Hg17|chr13 (98176520-98176377) | |
| 121-265, gnl|loxAfr1|scaffold_146298 (4817-4639) | |
| 121-265, gnl|mm7|chr14 (115895380-115895563) | |
| 121-265, gnl|Mm7|chr14 (115895527-115895383) | |
| 121-265, gnl|monDom2|scaffold_11 (53782331-53782158) | |
| 121-265, gnl|oryCun1|scaffold_195103 (8230-8042) | |
| 121-265, gnl|panTro1|chr14 (81416775-81416964) | |
| 121-265, gnl|rheMac2|chr17 (79099418-79099609) | |
| 121-265, gnl|rn3|chr15 (106593815-106594008) | |
| 121-265, gnl|tetNig1|chr2 (10871043-10870883) | |
| 121-265, gnl|xenTro1|scaffold_128 (1882578-1882754) | |
| 385-488, gnl|bosTau2|chr12 (40884384-40884487) | |
| 385-488, gnl|canFam2|chr22 (51755365-51755440) | |
| 385-488, gnl|danRer3|chr6 (7912174-7912250) | |
| 385-488, gnl|dasNov1|scaffold_49463 (1240-1165) | |
| 385-488, gnl|echTel1|scaffold_286385 (7218-7293) | |
| 385-488, gnl|fr1|chrUn (19333557-19333652) | |
| 385-488, gnl|galGal2|chr1 (137462799-137462729) | |
| 385-488, gnl|hg17|chr13 (98172052-98172127) | |
| 385-488, gnl|Hg17|chr13 (98172158-98172055) | |
| 385-488, gnl|loxAfr1|scaffold_51423 (34075-34150) | |
| 385-488, gnl|mm7|chr14 (115891378-115891453) | |
| 385-488, gnl|Mm7|chr14 (115891484-115891381) | |
| 385-488, gnl|monDom2|scaffold_11 (53784179-53784104) | |
| 385-488, gnl|oryCun1|scaffold_192137 (9095-9170) | |
| 385-488, gnl|panTro1|chr14 (81412454-81412529) | |
| 385-488, gnl|rheMac2|chr17 (79095257-79095332) | |
| 385-488, gnl|rn3|chr15 (106589400-106589475) | |
| 385-488, gnl|tetNig1|chr2 (10871672-10871593) | |
| 385-488, gnl|xenTro1|scaffold_128 (1882005-1882080) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 121-265, gnl|bosTau2|chr12 (40880504-40880648) | |
| 121-265, gnl|canFam2|chr22 (51757932-51758121) | |
| 121-265, gnl|danRer3|chr6 (7915505-7915708) | |
| 121-265, gnl|dasNov1|scaffold_48323 (7314-7123) | |
| 121-265, gnl|echTel1|scaffold_183801 (2217-2411) | |
| 121-265, gnl|fr1|chrUn (19333991-19334166) | |
| 121-265, gnl|galGal2|chr1 (137461005-137460819) | |
| 121-265, gnl|hg17|chr13 (98176374-98176563) | |
| 121-265, gnl|Hg17|chr13 (98176520-98176377) | |
| 121-265, gnl|loxAfr1|scaffold_146298 (4817-4639) | |
| 121-265, gnl|mm7|chr14 (115895380-115895563) | |
| 121-265, gnl|Mm7|chr14 (115895527-115895383) | |
| 121-265, gnl|monDom2|scaffold_11 (53782331-53782158) | |
| 121-265, gnl|oryCun1|scaffold_195103 (8230-8042) | |
| 121-265, gnl|panTro1|chr14 (81416775-81416964) | |
| 121-265, gnl|rheMac2|chr17 (79099418-79099609) | |
| 121-265, gnl|rn3|chr15 (106593815-106594008) | |
| 121-265, gnl|tetNig1|chr2 (10871043-10870883) | |
| 121-265, gnl|xenTro1|scaffold_128 (1882578-1882754) | |
| 385-488, gnl|bosTau2|chr12 (40884384-40884487) | |
| 385-488, gnl|canFam2|chr22 (51755365-51755440) | |
| 385-488, gnl|danRer3|chr6 (7912174-7912250) | |
| 385-488, gnl|dasNov1|scaffold_49463 (1240-1165) | |
| 385-488, gnl|echTel1|scaffold_286385 (7218-7293) | |
| 385-488, gnl|fr1|chrUn (19333557-19333652) | |
| 385-488, gnl|galGal2|chr1 (137462799-137462729) | |
| 385-488, gnl|hg17|chr13 (98172052-98172127) | |
| 385-488, gnl|Hg17|chr13 (98172158-98172055) | |
| 385-488, gnl|loxAfr1|scaffold_51423 (34075-34150) | |
| 385-488, gnl|mm7|chr14 (115891378-115891453) | |
| 385-488, gnl|Mm7|chr14 (115891484-115891381) | |
| 385-488, gnl|monDom2|scaffold_11 (53784179-53784104) | |
| 385-488, gnl|oryCun1|scaffold_192137 (9095-9170) | |
| 385-488, gnl|panTro1|chr14 (81412454-81412529) | |
| 385-488, gnl|rheMac2|chr17 (79095257-79095332) | |
| 385-488, gnl|rn3|chr15 (106589400-106589475) | |
| 385-488, gnl|tetNig1|chr2 (10871672-10871593) | |
| 385-488, gnl|xenTro1|scaffold_128 (1882005-1882080) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |