Non-Coding RNA Search

rnje30c_e23.y1

Sequence:


               
               TCCTGTCCACGCTTGGCCCCCAGGAGGACCTTTGAGGACCCATGGTGGAGGTGGTGTTGA
GAGCGGCCCCAGACGCAGTGGGAGCCAGAATGGGCCGGAACCGGGGCCACCTCGGTCCTC
TCGGCCCCGGCCCCCAGCCCTCCCCGCGGCGTCGCCTCTAGGCCTGGGCCTGGCCGACGA
CTTTCGCGAACCAACCACCAGGAGGACTACCGGTTCTTGGGATACCTTTCTCATGCTCTG
GAGTTTCAAGCCGCAAGCTAGAGCTTTCAGATATGTGGGTCACAAGGACGTTGTAACCAG
CGTGCAGTTTTCTCCTCTGGGAAACTTATGGGCATCTGCGTCACGAGACAGAACCGTTCG
ACTCTGGATTCCTGATAAGTAAGAGAAATGAACACCTGCTGTGCGCTGGTTTCAGAGATG
CGAAAGCAAATCGGAGCCAGGCTGGTGCTTGTGCCCTTCTTTGAATACCCAGGCTCCCTA
GTGGCCTGCACGTCTTCCGTCTGAAATCACAAAAGAGGTGGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTGTCCACGCTTGGCCCCCAGGAGGACCTTTGAGGACCCATGGTGGAGGTGGTGTTGA
GAGCGGCCCCAGACGCAGTGGGAGCCAGAATGGGCCGGAACCGGGGCCACCTCGGTCCTC
TCGGCCCCGGCCCCCAGCCCTCCCCGCGGCGTCGCCTCTAGGCCTGGGCCTGGCCGACGA
CTTTCGCGAACCAACCACCAGGAGGACTACCGGTTCTTGGGATACCTTTCTCATGCTCTG
GAGTTTCAAGCCGCAAGCTAGAGCTTTCAGATATGTGGGTCACAAGGACGTTGTAACCAG
CGTGCAGTTTTCTCCTCTGGGAAACTTATGGGCATCTGCGTCACGAGACAGAACCGTTCG
ACTCTGGATTCCTGATAAGTAAGAGAAATGAACACCTGCTGTGCGCTGGTTTCAGAGATG
CGAAAGCAAATCGGAGCCAGGCTGGTGCTTGTGCCCTTCTTTGAATACCCAGGCTCCCTA
GTGGCCTGCACGTCTTCCGTCTGAAATCACAAAAGAGGTGGCTGCC

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

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               6-206, gnl|bosTau2|chr5 (12585619-12585820)
               

               
               6-206, gnl|canFam2|chr15 (33493728-33494037)
               

               
               6-206, gnl|dasNov1|scaffold_16889 (46323-46507)
               

               
               6-206, gnl|echTel1|scaffold_310767 (50719-50881)
               

               
               6-206, gnl|hg17|chr12 (88421055-88421223)
               

               
               6-206, gnl|Hg17|chr12 (88421296-88421100)
               

               
               6-206, gnl|loxAfr1|scaffold_7311 (32685-32511)
               

               
               6-206, gnl|mm7|chr10 (98670123-98669976)
               

               
               6-206, gnl|monDom2|scaffold_34 (27535343-27535201)
               

               
               6-206, gnl|oryCun1|scaffold_194740 (4499-4682)
               

               
               6-206, gnl|panTro1|chr10 (90547604-90547772)
               

               
               6-206, gnl|rheMac2|chr11 (90670616-90670797)
               

               
               6-206, gnl|rn3|chr7 (36704764-36704609)
               


               
               207-518, gnl|bosTau2|chr5 (12611920-12612227)
               

               
               207-518, gnl|Hg17|chr12 (88393587-88393299)
               

               
               207-518, gnl|Mm7|chr10 (98686236-98686624)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-206, gnl|bosTau2|chr5 (12585619-12585820)
               

               
               6-206, gnl|canFam2|chr15 (33493728-33494037)
               

               
               6-206, gnl|dasNov1|scaffold_16889 (46323-46507)
               

               
               6-206, gnl|echTel1|scaffold_310767 (50719-50881)
               

               
               6-206, gnl|hg17|chr12 (88421055-88421223)
               

               
               6-206, gnl|Hg17|chr12 (88421296-88421100)
               

               
               6-206, gnl|loxAfr1|scaffold_7311 (32685-32511)
               

               
               6-206, gnl|mm7|chr10 (98670123-98669976)
               

               
               6-206, gnl|monDom2|scaffold_34 (27535343-27535201)
               

               
               6-206, gnl|oryCun1|scaffold_194740 (4499-4682)
               

               
               6-206, gnl|panTro1|chr10 (90547604-90547772)
               

               
               6-206, gnl|rheMac2|chr11 (90670616-90670797)
               

               
               6-206, gnl|rn3|chr7 (36704764-36704609)
               


               
               207-518, gnl|bosTau2|chr5 (12611920-12612227)
               

               
               207-518, gnl|Hg17|chr12 (88393587-88393299)
               

               
               207-518, gnl|Mm7|chr10 (98686236-98686624)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nje (0.16592)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	6-206, gnl\|bosTau2\|chr5 (12585619-12585820)
	6-206, gnl\|canFam2\|chr15 (33493728-33494037)
	6-206, gnl\|dasNov1\|scaffold_16889 (46323-46507)
	6-206, gnl\|echTel1\|scaffold_310767 (50719-50881)
	6-206, gnl\|hg17\|chr12 (88421055-88421223)
	6-206, gnl\|Hg17\|chr12 (88421296-88421100)
	6-206, gnl\|loxAfr1\|scaffold_7311 (32685-32511)
	6-206, gnl\|mm7\|chr10 (98670123-98669976)
	6-206, gnl\|monDom2\|scaffold_34 (27535343-27535201)
	6-206, gnl\|oryCun1\|scaffold_194740 (4499-4682)
	6-206, gnl\|panTro1\|chr10 (90547604-90547772)
	6-206, gnl\|rheMac2\|chr11 (90670616-90670797)
	6-206, gnl\|rn3\|chr7 (36704764-36704609)

	207-518, gnl\|bosTau2\|chr5 (12611920-12612227)
	207-518, gnl\|Hg17\|chr12 (88393587-88393299)
	207-518, gnl\|Mm7\|chr10 (98686236-98686624)