Non-Coding RNA Search

rnlu1804b_a18.y1

Sequence:


               
               GTCCTCGCTTGCTCCCGCCCGGAACACCTGCCCCAGAGATCTCTCCACTGTGCTTTCAGA
AGTGCCCTTCCTGGCTGCTCTGTTCCCCGGGACGGTGGCAGTATCGAAGCTTGTGACAAG
TGCCTTCACACAGACTCTCCCCTCGCAACTGTCAGCGTCTGCCGTGGGCACCGAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCTCGCTTGCTCCCGCCCGGAACACCTGCCCCAGAGATCTCTCCACTGTGCTTTCAGA
AGTGCCCTTCCTGGCTGCTCTGTTCCCCGGGACGGTGGCAGTATCGAAGCTTGTGACAAG
TGCCTTCACACAGACTCTCCCCTCGCAACTGTCAGCGTCTGCCGTGGGCACCGAGCC

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-172, gnl|bosTau2|chr21 (49587166-49587334)
               

               
               1-172, gnl|canFam2|chr8 (75582876-75583066)
               

               
               1-172, gnl|fr1|chrUn (245500571-245500834)
               

               
               1-172, gnl|galGal2|chr5 (48886105-48886311)
               

               
               1-172, gnl|hg17|chr14 (104679182-104679370)
               

               
               1-172, gnl|Hg17|chr14 (104679403-104679232)
               

               
               1-172, gnl|loxAfr1|scaffold_56814 (6671-6861)
               

               
               1-172, gnl|mm7|chr12 (110432823-110433011)
               

               
               1-172, gnl|Mm7|chr12 (110433040-110432873)
               

               
               1-172, gnl|monDom2|scaffold_6 (104961067-104960842)
               

               
               1-172, gnl|panTro1|chr15 (105366280-105366468)
               

               
               1-172, gnl|rheMac2|chr7 (168497877-168498065)
               

               
               1-172, gnl|rn3|chr6 (137915113-137915301)
               

               
               1-172, gnl|xenTro1|scaffold_421 (809522-809300)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-172, gnl|bosTau2|chr21 (49587166-49587334)
               

               
               1-172, gnl|canFam2|chr8 (75582876-75583066)
               

               
               1-172, gnl|fr1|chrUn (245500571-245500834)
               

               
               1-172, gnl|galGal2|chr5 (48886105-48886311)
               

               
               1-172, gnl|hg17|chr14 (104679182-104679370)
               

               
               1-172, gnl|Hg17|chr14 (104679403-104679232)
               

               
               1-172, gnl|loxAfr1|scaffold_56814 (6671-6861)
               

               
               1-172, gnl|mm7|chr12 (110432823-110433011)
               

               
               1-172, gnl|Mm7|chr12 (110433040-110432873)
               

               
               1-172, gnl|monDom2|scaffold_6 (104961067-104960842)
               

               
               1-172, gnl|panTro1|chr15 (105366280-105366468)
               

               
               1-172, gnl|rheMac2|chr7 (168497877-168498065)
               

               
               1-172, gnl|rn3|chr6 (137915113-137915301)
               

               
               1-172, gnl|xenTro1|scaffold_421 (809522-809300)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-172, gnl\|bosTau2\|chr21 (49587166-49587334)
	1-172, gnl\|canFam2\|chr8 (75582876-75583066)
	1-172, gnl\|fr1\|chrUn (245500571-245500834)
	1-172, gnl\|galGal2\|chr5 (48886105-48886311)
	1-172, gnl\|hg17\|chr14 (104679182-104679370)
	1-172, gnl\|Hg17\|chr14 (104679403-104679232)
	1-172, gnl\|loxAfr1\|scaffold_56814 (6671-6861)
	1-172, gnl\|mm7\|chr12 (110432823-110433011)
	1-172, gnl\|Mm7\|chr12 (110433040-110432873)
	1-172, gnl\|monDom2\|scaffold_6 (104961067-104960842)
	1-172, gnl\|panTro1\|chr15 (105366280-105366468)
	1-172, gnl\|rheMac2\|chr7 (168497877-168498065)
	1-172, gnl\|rn3\|chr6 (137915113-137915301)
	1-172, gnl\|xenTro1\|scaffold_421 (809522-809300)